Experiment: Vanillin 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03265 and AO356_03270 are separated by 230 nucleotides AO356_03270 and AO356_03275 are separated by 11 nucleotides
AO356_03265: AO356_03265 - chemotaxis protein, at 724,012 to 725,493
_03265
AO356_03270: AO356_03270 - terminase, at 725,724 to 726,098
_03270
AO356_03275: AO356_03275 - acyl-CoA thioesterase, at 726,110 to 726,907
_03275
Position (kb) 725
726
727 Strain fitness (log2 ratio) -1
0
1
2 at 724.805 kb on - strand, within AO356_03265 at 724.805 kb on - strand, within AO356_03265 at 725.126 kb on + strand, within AO356_03265 at 725.127 kb on - strand, within AO356_03265 at 725.602 kb on + strand at 725.621 kb on - strand at 725.621 kb on - strand at 725.682 kb on + strand at 725.682 kb on + strand at 725.682 kb on + strand at 725.682 kb on + strand at 725.683 kb on - strand at 725.683 kb on - strand at 725.683 kb on - strand at 725.683 kb on - strand at 725.683 kb on - strand at 725.683 kb on - strand at 725.695 kb on + strand at 725.695 kb on + strand at 725.695 kb on + strand at 725.695 kb on + strand at 725.695 kb on + strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.717 kb on + strand at 725.717 kb on + strand at 725.718 kb on - strand at 725.718 kb on - strand at 725.718 kb on - strand at 725.718 kb on - strand at 725.718 kb on - strand at 725.769 kb on + strand, within AO356_03270 at 725.770 kb on - strand, within AO356_03270 at 725.863 kb on + strand, within AO356_03270 at 725.863 kb on + strand, within AO356_03270 at 725.864 kb on - strand, within AO356_03270 at 726.089 kb on + strand at 726.090 kb on - strand at 726.090 kb on - strand at 726.090 kb on - strand at 726.225 kb on + strand, within AO356_03275 at 726.225 kb on + strand, within AO356_03275 at 726.225 kb on + strand, within AO356_03275 at 726.225 kb on + strand, within AO356_03275 at 726.226 kb on - strand, within AO356_03275 at 726.226 kb on - strand, within AO356_03275 at 726.433 kb on + strand, within AO356_03275 at 726.434 kb on - strand, within AO356_03275 at 726.513 kb on + strand, within AO356_03275 at 726.513 kb on + strand, within AO356_03275 at 726.514 kb on - strand, within AO356_03275 at 726.736 kb on + strand, within AO356_03275 at 726.737 kb on - strand, within AO356_03275 at 726.737 kb on - strand, within AO356_03275 at 726.784 kb on + strand, within AO356_03275 at 726.784 kb on + strand, within AO356_03275 at 726.785 kb on - strand, within AO356_03275 at 726.785 kb on - strand, within AO356_03275 at 726.792 kb on + strand, within AO356_03275 at 726.792 kb on + strand, within AO356_03275 at 726.792 kb on + strand, within AO356_03275 at 726.793 kb on - strand, within AO356_03275 at 726.793 kb on - strand, within AO356_03275 at 727.064 kb on + strand at 727.064 kb on + strand at 727.064 kb on + strand at 727.064 kb on + strand at 727.065 kb on - strand at 727.065 kb on - strand at 727.079 kb on - strand at 727.079 kb on - strand at 727.079 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vanillin 1.25 mM remove 724,805 - AO356_03265 0.54 +0.5 724,805 - AO356_03265 0.54 -0.1 725,126 + AO356_03265 0.75 +1.2 725,127 - AO356_03265 0.75 +1.1 725,602 + -0.6 725,621 - -0.1 725,621 - +0.6 725,682 + -0.0 725,682 + +0.6 725,682 + -0.6 725,682 + +2.2 725,683 - -0.1 725,683 - +0.4 725,683 - -1.4 725,683 - -1.2 725,683 - -0.6 725,683 - +0.2 725,695 + -0.1 725,695 + -1.4 725,695 + -0.1 725,695 + +0.3 725,695 + +0.9 725,696 - +1.0 725,696 - -0.9 725,696 - +0.9 725,696 - -0.6 725,696 - -0.3 725,696 - +0.7 725,696 - +1.1 725,717 + +0.6 725,717 + +0.0 725,718 - +1.7 725,718 - +0.2 725,718 - +0.1 725,718 - -0.4 725,718 - +0.3 725,769 + AO356_03270 0.12 -1.7 725,770 - AO356_03270 0.12 -1.6 725,863 + AO356_03270 0.37 +0.0 725,863 + AO356_03270 0.37 +0.1 725,864 - AO356_03270 0.37 +0.8 726,089 + -0.9 726,090 - +0.5 726,090 - -0.1 726,090 - -0.6 726,225 + AO356_03275 0.14 +0.3 726,225 + AO356_03275 0.14 +1.8 726,225 + AO356_03275 0.14 +0.7 726,225 + AO356_03275 0.14 +0.4 726,226 - AO356_03275 0.15 +0.1 726,226 - AO356_03275 0.15 -0.3 726,433 + AO356_03275 0.40 -0.3 726,434 - AO356_03275 0.41 +0.0 726,513 + AO356_03275 0.51 +0.3 726,513 + AO356_03275 0.51 +0.2 726,514 - AO356_03275 0.51 +0.1 726,736 + AO356_03275 0.78 +0.9 726,737 - AO356_03275 0.79 +0.8 726,737 - AO356_03275 0.79 +0.6 726,784 + AO356_03275 0.84 +0.1 726,784 + AO356_03275 0.84 +0.3 726,785 - AO356_03275 0.85 +1.1 726,785 - AO356_03275 0.85 -0.5 726,792 + AO356_03275 0.85 -0.6 726,792 + AO356_03275 0.85 +0.2 726,792 + AO356_03275 0.85 +0.2 726,793 - AO356_03275 0.86 +0.7 726,793 - AO356_03275 0.86 +0.3 727,064 + -0.0 727,064 + +1.3 727,064 + -0.5 727,064 + -0.2 727,065 - +0.2 727,065 - -0.1 727,079 - +0.2 727,079 - -0.5 727,079 - -0.5
Or see this region's nucleotide sequence