Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1370 and DvMF_1371 are separated by 495 nucleotides DvMF_1371 and DvMF_1372 are separated by 108 nucleotides DvMF_1372 and DvMF_1373 are separated by 687 nucleotides DvMF_1373 and DvMF_1374 overlap by 1 nucleotides
DvMF_1370: DvMF_1370 - DNA binding domain protein, excisionase family (RefSeq), at 1,678,074 to 1,678,358
_1370
DvMF_1371: DvMF_1371 - no description, at 1,678,854 to 1,678,958
_1371
DvMF_1372: DvMF_1372 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 1,679,067 to 1,681,502
_1372
DvMF_1373: DvMF_1373 - hypothetical protein (RefSeq), at 1,682,190 to 1,682,438
_1373
DvMF_1374: DvMF_1374 - putative PAS/PAC sensor protein (RefSeq), at 1,682,438 to 1,683,664
_1374
Position (kb)
1679
1680
1681
1682 Strain fitness (log2 ratio)
-1
0
1 at 1678.097 kb on + strand at 1678.248 kb on + strand, within DvMF_1370 at 1678.311 kb on + strand, within DvMF_1370 at 1678.337 kb on + strand at 1678.338 kb on + strand at 1678.345 kb on - strand at 1678.396 kb on + strand at 1678.446 kb on + strand at 1678.613 kb on + strand at 1678.616 kb on - strand at 1678.790 kb on + strand at 1679.204 kb on - strand at 1679.265 kb on + strand at 1679.286 kb on - strand at 1679.325 kb on + strand, within DvMF_1372 at 1679.393 kb on - strand, within DvMF_1372 at 1679.637 kb on - strand, within DvMF_1372 at 1680.021 kb on - strand, within DvMF_1372 at 1680.052 kb on - strand, within DvMF_1372 at 1680.059 kb on + strand, within DvMF_1372 at 1680.108 kb on - strand, within DvMF_1372 at 1680.285 kb on + strand, within DvMF_1372 at 1680.406 kb on - strand, within DvMF_1372 at 1680.790 kb on + strand, within DvMF_1372 at 1680.816 kb on - strand, within DvMF_1372 at 1680.859 kb on + strand, within DvMF_1372 at 1681.079 kb on - strand, within DvMF_1372 at 1681.138 kb on - strand, within DvMF_1372 at 1681.196 kb on - strand, within DvMF_1372 at 1681.330 kb on + strand at 1681.639 kb on - strand at 1682.015 kb on - strand at 1682.098 kb on + strand at 1682.116 kb on - strand at 1682.143 kb on + strand at 1682.164 kb on - strand at 1682.196 kb on - strand at 1682.227 kb on + strand, within DvMF_1373
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,678,097 + -0.1 1,678,248 + DvMF_1370 0.61 -0.3 1,678,311 + DvMF_1370 0.83 -0.1 1,678,337 + -0.3 1,678,338 + -0.6 1,678,345 - +0.3 1,678,396 + -0.9 1,678,446 + -0.2 1,678,613 + +0.6 1,678,616 - -0.4 1,678,790 + -1.7 1,679,204 - -0.8 1,679,265 + -1.5 1,679,286 - +0.1 1,679,325 + DvMF_1372 0.11 -0.3 1,679,393 - DvMF_1372 0.13 -1.0 1,679,637 - DvMF_1372 0.23 -0.3 1,680,021 - DvMF_1372 0.39 +0.6 1,680,052 - DvMF_1372 0.40 -0.3 1,680,059 + DvMF_1372 0.41 -0.5 1,680,108 - DvMF_1372 0.43 +0.1 1,680,285 + DvMF_1372 0.50 -0.8 1,680,406 - DvMF_1372 0.55 -0.3 1,680,790 + DvMF_1372 0.71 +0.1 1,680,816 - DvMF_1372 0.72 -0.4 1,680,859 + DvMF_1372 0.74 -0.4 1,681,079 - DvMF_1372 0.83 -1.3 1,681,138 - DvMF_1372 0.85 -0.1 1,681,196 - DvMF_1372 0.87 -0.7 1,681,330 + -0.2 1,681,639 - -0.1 1,682,015 - -0.7 1,682,098 + -0.2 1,682,116 - -0.2 1,682,143 + +0.3 1,682,164 - -1.1 1,682,196 - -0.6 1,682,227 + DvMF_1373 0.15 +0.9
Or see this region's nucleotide sequence