Strain Fitness in Shewanella loihica PV-4 around Shew_3240

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
3,873,128	+				+0.1
3,873,164	+				+0.4
3,873,167	-				-0.1
3,873,172	-				+0.2
3,873,172	-				+0.2
3,873,172	-				+0.3
3,873,498	+				+0.3
3,873,498	+				+0.0
3,873,858	-				+0.0
3,873,883	-				+0.7
3,874,250	-		Shew_3240	0.63	-1.5
3,874,323	-		Shew_3240	0.75	-0.3
3,874,366	-		Shew_3240	0.82	+0.1
3,874,669	-				+0.1
3,874,892	-		Shew_3241	0.11	-0.1
3,875,015	-		Shew_3241	0.17	+0.4
3,875,280	+		Shew_3241	0.31	-0.1
3,875,443	-		Shew_3241	0.40	-1.6