Strain Fitness in Shewanella loihica PV-4 around Shew_2860

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
3,390,432	+		Shew_2858	0.74	-0.2
3,391,069	+		Shew_2859	0.47	+0.0
3,391,668	-		Shew_2860	0.20	+0.3
3,392,075	-		Shew_2860	0.52	+1.2
3,392,527	+		Shew_2860	0.86	-0.2
3,392,818	-		Shew_2861	0.11	-0.6
3,392,848	+		Shew_2861	0.14	-0.1
3,392,856	-		Shew_2861	0.15	-1.3
3,392,961	+		Shew_2861	0.25	-0.2
3,392,961	+		Shew_2861	0.25	-0.3
3,393,091	-		Shew_2861	0.38	+0.2
3,393,139	+		Shew_2861	0.42	+0.1
3,393,139	+		Shew_2861	0.42	+0.5
3,393,309	-		Shew_2861	0.59	+0.1
3,393,369	+		Shew_2861	0.64	-1.0
3,393,371	+		Shew_2861	0.65	-0.0