Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS16990

Experiment: R2A with Magnesium sulfate 3.90625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Magnesium sulfate 3.90625 mM
3,714,720	+				-0.5
3,714,720	+				-0.0
3,714,720	+				+0.0
3,714,720	+				+0.4
3,714,720	+				-1.0
3,714,720	+				+0.2
3,714,720	+				+0.4
3,714,720	+				+0.1
3,714,720	+				-0.7
3,714,720	+				+0.7
3,714,720	+				+2.2
3,714,720	+				-0.9
3,714,720	+				+1.2
3,714,720	+				-0.9
3,714,720	+				+0.3
3,714,720	+				+0.7
3,714,720	+				-1.8
3,714,720	+				+0.5
3,714,720	+				+0.4
3,714,720	+				-0.8
3,714,720	+				+1.2
3,714,721	-				-0.1
3,714,721	-				+0.7
3,714,721	-				-1.2
3,714,721	-				+1.1
3,714,721	-				-0.3
3,714,721	-				+0.1
3,714,721	-				-0.6
3,714,721	-				-0.6
3,714,721	-				+1.1
3,714,721	-				-1.7
3,714,721	-				-0.3
3,714,721	-				+0.7
3,714,721	-				+0.1
3,714,721	-				-0.2
3,714,721	-				-0.2
3,714,721	-				-2.4
3,714,721	-				+0.7
3,714,721	-				+0.6
3,714,721	-				-1.7
3,714,721	-				-0.5
3,714,721	-				+0.7
3,715,397	+				+0.5
3,715,397	+				-0.7
3,715,397	+				+0.2
3,715,397	+				-0.2
3,715,397	+				-1.9
3,715,397	+				-0.2
3,715,397	+				-1.1
3,715,397	+				+0.4
3,715,397	+				+1.0
3,715,397	+				+0.7
3,715,397	+				-0.3
3,715,397	+				-1.4
3,715,397	+				+0.8
3,715,397	+				+2.4
3,715,397	+				+1.7
3,715,397	+				-0.6
3,715,397	+				+0.9
3,715,397	+				-0.1
3,715,397	+				-0.6
3,715,397	+				-0.2
3,715,397	+				-0.2
3,715,397	+				+0.2
3,715,397	+				-0.3
3,715,397	+				+0.7
3,715,397	+				+0.1
3,715,397	+				+1.4
3,715,397	+				-0.2
3,715,397	+				-1.6
3,715,397	+				+0.4
3,715,397	+				-1.2
3,715,397	+				-1.0
3,715,397	+				+0.4
3,715,397	+				-0.3
3,715,397	+				-1.5
3,715,397	+				-0.5
3,715,397	+				-0.1
3,715,397	+				-0.2
3,715,398	-				+0.9
3,715,398	-				-1.4
3,715,398	-				+0.4
3,715,398	-				+0.1
3,715,398	-				-0.8
3,715,398	-				+0.1
3,715,398	-				-1.0
3,715,398	-				+1.4
3,715,398	-				-1.5
3,715,398	-				+0.8
3,715,398	-				-0.3
3,715,398	-				-0.7
3,715,398	-				+0.0
3,715,398	-				-0.3
3,715,398	-				-2.2
3,715,398	-				+0.3
3,715,398	-				-0.6
3,715,398	-				+0.5
3,715,398	-				+0.2
3,715,398	-				+0.5
3,715,398	-				-1.2
3,715,398	-				-0.1
3,715,398	-				+1.9
3,715,398	-				+1.1
3,715,398	-				-0.0
3,715,468	+				-0.3
3,715,469	-				-0.3
3,715,470	+				+0.3
3,715,601	+				-1.1
3,716,243	+		LRK54_RS16990	0.37	+0.2
3,716,243	+		LRK54_RS16990	0.37	+1.8
3,716,243	+		LRK54_RS16990	0.37	+0.5
3,716,243	+		LRK54_RS16990	0.37	+0.6
3,716,243	+		LRK54_RS16990	0.37	+0.7
3,716,243	+		LRK54_RS16990	0.37	+0.9
3,716,243	+		LRK54_RS16990	0.37	+1.2
3,716,243	+		LRK54_RS16990	0.37	-1.2
3,716,243	+		LRK54_RS16990	0.37	+0.7
3,716,243	+		LRK54_RS16990	0.37	+1.7
3,716,243	+		LRK54_RS16990	0.37	-2.1
3,716,243	+		LRK54_RS16990	0.37	+0.7
3,716,244	-		LRK54_RS16990	0.37	-0.7
3,716,244	-		LRK54_RS16990	0.37	+0.7
3,716,244	-		LRK54_RS16990	0.37	+1.7
3,716,244	-		LRK54_RS16990	0.37	+0.5
3,716,244	-		LRK54_RS16990	0.37	+1.1
3,716,435	+		LRK54_RS16990	0.46	-0.7
3,716,435	+		LRK54_RS16990	0.46	+1.1
3,716,436	-		LRK54_RS16990	0.46	+1.3
3,716,436	-		LRK54_RS16990	0.46	+0.0
3,716,436	-		LRK54_RS16990	0.46	-0.0
3,716,436	-		LRK54_RS16990	0.46	+1.3
3,716,436	-		LRK54_RS16990	0.46	-1.3
3,716,436	-		LRK54_RS16990	0.46	-1.1
3,716,445	-		LRK54_RS16990	0.47	+0.7
3,716,650	+		LRK54_RS16990	0.57	-1.3
3,717,049	-		LRK54_RS16990	0.77	+1.7
3,717,058	+		LRK54_RS16990	0.77	+0.3
3,717,058	+		LRK54_RS16990	0.77	-0.5
3,717,058	+		LRK54_RS16990	0.77	-0.1
3,717,058	+		LRK54_RS16990	0.77	-2.5
3,717,058	+		LRK54_RS16990	0.77	-1.8
3,717,058	+		LRK54_RS16990	0.77	+0.5
3,717,059	-		LRK54_RS16990	0.77	+1.1
3,717,059	-		LRK54_RS16990	0.77	+0.4
3,717,317	+		LRK54_RS16990	0.90	-0.5
3,717,317	+		LRK54_RS16990	0.90	-0.7
3,717,318	-		LRK54_RS16990	0.90	+0.4
3,717,318	-		LRK54_RS16990	0.90	-1.5
3,717,318	-		LRK54_RS16990	0.90	+0.9
3,717,318	-		LRK54_RS16990	0.90	+0.1
3,717,395	+				-0.5
3,717,395	+				+0.7
3,717,395	+				-1.7
3,717,395	+				-1.2
3,717,395	+				+1.3
3,717,395	+				-1.3
3,717,395	+				-0.5
3,717,396	-				+0.4
3,717,396	-				-1.5
3,717,396	-				+2.1
3,717,396	-				-1.3
3,717,396	-				+1.3
3,717,396	-				-0.1
3,717,400	+				+1.2
3,717,400	+				-0.0
3,717,401	-				-0.1
3,717,401	-				-0.2
3,717,401	-				+1.0
3,717,401	-				-1.1
3,717,401	-				-0.9
3,717,401	-				-0.9
3,717,401	-				+0.4
3,717,401	-				-0.7
3,717,591	+				-0.9
3,717,591	+				-1.1
3,717,591	+				+0.7
3,717,591	+				-0.8
3,717,591	+				+0.5
3,717,591	+				+0.1
3,717,591	+				-2.1
3,717,591	+				-0.9
3,717,591	+				-1.3
3,717,591	+				-0.2
3,717,591	+				-0.8
3,717,591	+				-0.5
3,717,591	+				-2.0
3,717,591	+				-0.4
3,717,591	+				-0.1
3,717,591	+				-0.7
3,717,591	+				+0.9
3,717,591	+				-0.4
3,717,592	-				+1.1
3,717,592	-				-0.9
3,717,592	-				-0.4
3,717,592	-				+0.4
3,717,592	-				-1.9
3,717,592	-				+0.4
3,717,592	-				+0.1
3,717,592	-				+0.7
3,717,592	-				-1.2
3,717,592	-				-1.7
3,717,592	-				-0.7
3,717,592	-				-0.1
3,717,592	-				+0.2
3,717,592	-				+0.9
3,717,592	-				+1.7
3,717,592	-				+0.7
3,717,592	-				+0.1
3,717,648	+		LRK54_RS16995	0.12	-0.1
3,717,648	+		LRK54_RS16995	0.12	+0.2
3,717,648	+		LRK54_RS16995	0.12	+0.3
3,717,648	+		LRK54_RS16995	0.12	+0.6
3,717,648	+		LRK54_RS16995	0.12	-1.0
3,717,648	+		LRK54_RS16995	0.12	-0.8
3,717,648	+		LRK54_RS16995	0.12	-0.4
3,717,648	+		LRK54_RS16995	0.12	-0.5
3,717,648	+		LRK54_RS16995	0.12	-0.5
3,717,648	+		LRK54_RS16995	0.12	-1.1
3,717,648	+		LRK54_RS16995	0.12	-0.4
3,717,648	+		LRK54_RS16995	0.12	-1.6
3,717,648	+		LRK54_RS16995	0.12	+1.0
3,717,648	+		LRK54_RS16995	0.12	-2.0
3,717,648	+		LRK54_RS16995	0.12	+1.7
3,717,648	+		LRK54_RS16995	0.12	-0.8
3,717,648	+		LRK54_RS16995	0.12	+1.0
3,717,649	-		LRK54_RS16995	0.12	-0.6
3,717,649	-		LRK54_RS16995	0.12	+0.9
3,717,649	-		LRK54_RS16995	0.12	+0.7
3,717,649	-		LRK54_RS16995	0.12	-1.7
3,717,649	-		LRK54_RS16995	0.12	-0.1
3,717,649	-		LRK54_RS16995	0.12	-0.1
3,717,649	-		LRK54_RS16995	0.12	-0.1
3,717,649	-		LRK54_RS16995	0.12	-0.9
3,717,649	-		LRK54_RS16995	0.12	-2.5
3,717,649	-		LRK54_RS16995	0.12	-1.7
3,717,649	-		LRK54_RS16995	0.12	+0.9
3,717,649	-		LRK54_RS16995	0.12	+0.7
3,717,649	-		LRK54_RS16995	0.12	+0.1
3,717,649	-		LRK54_RS16995	0.12	-0.3
3,717,649	-		LRK54_RS16995	0.12	+1.4
3,717,649	-		LRK54_RS16995	0.12	-0.9
3,718,044	+		LRK54_RS16995	0.77	-1.1
3,718,045	-		LRK54_RS16995	0.77	-0.6
3,718,045	-		LRK54_RS16995	0.77	-0.1
3,718,045	-		LRK54_RS16995	0.77	-0.4
3,718,143	+				+0.7
3,718,143	+				-0.6
3,718,143	+				-0.7
3,718,143	+				+0.0
3,718,143	+				-0.6
3,718,143	+				+1.7
3,718,143	+				+0.7
3,718,143	+				-0.3
3,718,143	+				+1.3
3,718,143	+				-0.7
3,718,143	+				-0.3
3,718,143	+				+0.5
3,718,143	+				+0.1
3,718,143	+				+0.0
3,718,143	+				-0.6
3,718,143	+				-1.1
3,718,143	+				+0.1
3,718,143	+				-0.3
3,718,144	-				-0.2
3,718,144	-				+0.1
3,718,144	-				-0.5
3,718,144	-				-0.2
3,718,144	-				+0.7
3,718,144	-				-1.0
3,718,144	-				+0.7
3,718,144	-				+0.2
3,718,144	-				+0.6
3,718,144	-				-0.3
3,718,144	-				-2.2
3,718,144	-				+0.3
3,718,146	+				-0.7
3,718,146	+				-0.9
3,718,146	+				-0.3
3,718,146	+				+1.2
3,718,146	+				+0.1
3,718,146	+				+0.3
3,718,146	+				-1.4
3,718,147	-				-0.9
3,718,147	-				+0.1
3,718,147	-				+0.9
3,718,147	-				+0.0
3,718,147	-				-1.5
3,718,147	-				+1.0
3,718,147	-				-0.0
3,718,147	-				+0.1
3,718,147	-				+0.7
3,718,147	-				+0.7
3,718,147	-				-1.1
3,718,147	-				-0.7
3,718,147	-				-1.2
3,718,274	+				+1.7
3,718,274	+				+0.7
3,718,275	-				-1.2