Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS02510

Experiment: R2A with Magnesium sulfate 3.90625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntLRK54_RS02500 and LRK54_RS02505 are separated by 35 nucleotidesLRK54_RS02505 and LRK54_RS02510 are separated by 1 nucleotidesLRK54_RS02510 and LRK54_RS02515 are separated by 133 nucleotides LRK54_RS02500: LRK54_RS02500 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 542,040 to 542,813 _RS02500 LRK54_RS02505: LRK54_RS02505 - ribosome maturation factor RimM, at 542,849 to 543,364 _RS02505 LRK54_RS02510: LRK54_RS02510 - 30S ribosomal protein S16, at 543,366 to 543,620 _RS02510 LRK54_RS02515: LRK54_RS02515 - signal recognition particle protein, at 543,754 to 545,133 _RS02515 Position (kb) 543 544Strain fitness (log2 ratio) -1 0 1at 543.715 kb on - strandat 543.715 kb on - strandat 543.715 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with Magnesium sulfate 3.90625 mM
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543,715 - -0.3
543,715 - -1.6
543,715 - +0.4

Or see this region's nucleotide sequence