Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2630 and DvMF_2631 are separated by 11 nucleotides DvMF_2631 and DvMF_2632 are separated by 1 nucleotides DvMF_2632 and DvMF_2633 are separated by 535 nucleotides
DvMF_2630: DvMF_2630 - penicillin-binding protein, 1A family (RefSeq), at 3,321,715 to 3,324,138
_2630
DvMF_2631: DvMF_2631 - hypothetical protein (RefSeq), at 3,324,150 to 3,324,980
_2631
DvMF_2632: DvMF_2632 - dolichyl-phosphate-mannose-protein mannosyltransferase family protein (RefSeq), at 3,324,982 to 3,326,772
_2632
DvMF_2633: DvMF_2633 - Aldehyde Dehydrogenase (RefSeq), at 3,327,308 to 3,328,690
_2633
Position (kb)
3324
3325
3326
3327 Strain fitness (log2 ratio)
-2
-1
0
1 at 3324.258 kb on - strand, within DvMF_2631 at 3324.305 kb on + strand, within DvMF_2631 at 3324.354 kb on - strand, within DvMF_2631 at 3324.750 kb on + strand, within DvMF_2631 at 3324.780 kb on + strand, within DvMF_2631 at 3324.806 kb on + strand, within DvMF_2631 at 3324.812 kb on + strand, within DvMF_2631 at 3324.834 kb on + strand, within DvMF_2631 at 3326.871 kb on - strand at 3326.883 kb on + strand at 3326.908 kb on + strand at 3327.038 kb on - strand at 3327.526 kb on - strand, within DvMF_2633 at 3327.644 kb on + strand, within DvMF_2633 at 3327.678 kb on - strand, within DvMF_2633 at 3327.679 kb on - strand, within DvMF_2633 at 3327.699 kb on - strand, within DvMF_2633
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with methylglyoxal 0.0156 % remove 3,324,258 - DvMF_2631 0.13 -2.3 3,324,305 + DvMF_2631 0.19 -0.3 3,324,354 - DvMF_2631 0.25 -0.5 3,324,750 + DvMF_2631 0.72 -0.2 3,324,780 + DvMF_2631 0.76 -0.8 3,324,806 + DvMF_2631 0.79 -0.9 3,324,812 + DvMF_2631 0.80 -2.2 3,324,834 + DvMF_2631 0.82 +0.1 3,326,871 - -0.4 3,326,883 + -0.7 3,326,908 + -0.4 3,327,038 - +0.8 3,327,526 - DvMF_2633 0.16 +0.4 3,327,644 + DvMF_2633 0.24 -0.4 3,327,678 - DvMF_2633 0.27 -1.7 3,327,679 - DvMF_2633 0.27 -0.0 3,327,699 - DvMF_2633 0.28 -0.5
Or see this region's nucleotide sequence