Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2581 and DvMF_2582 are separated by 344 nucleotides DvMF_2582 and DvMF_2583 are separated by 427 nucleotides
DvMF_2581: DvMF_2581 - cation diffusion facilitator family transporter (RefSeq), at 3,264,547 to 3,265,524
_2581
DvMF_2582: DvMF_2582 - dihydroxyacetone kinase subunit DhaK (RefSeq), at 3,265,869 to 3,266,933
_2582
DvMF_2583: DvMF_2583 - dihydroxyacetone kinase, L subunit (RefSeq), at 3,267,361 to 3,267,993
_2583
Position (kb)
3265
3266
3267 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3264.960 kb on - strand, within DvMF_2581 at 3264.970 kb on + strand, within DvMF_2581 at 3265.042 kb on + strand, within DvMF_2581 at 3265.093 kb on - strand, within DvMF_2581 at 3265.168 kb on - strand, within DvMF_2581 at 3265.170 kb on + strand, within DvMF_2581 at 3265.173 kb on - strand, within DvMF_2581 at 3265.434 kb on + strand at 3265.785 kb on + strand at 3265.798 kb on - strand at 3266.002 kb on - strand, within DvMF_2582 at 3266.062 kb on + strand, within DvMF_2582 at 3266.067 kb on + strand, within DvMF_2582 at 3266.102 kb on - strand, within DvMF_2582 at 3266.185 kb on - strand, within DvMF_2582 at 3266.291 kb on + strand, within DvMF_2582 at 3266.323 kb on - strand, within DvMF_2582 at 3266.373 kb on + strand, within DvMF_2582 at 3266.531 kb on - strand, within DvMF_2582 at 3266.544 kb on + strand, within DvMF_2582 at 3266.554 kb on - strand, within DvMF_2582 at 3266.563 kb on + strand, within DvMF_2582 at 3266.604 kb on + strand, within DvMF_2582 at 3266.612 kb on - strand, within DvMF_2582 at 3266.705 kb on - strand, within DvMF_2582 at 3266.928 kb on + strand at 3267.001 kb on - strand at 3267.001 kb on - strand at 3267.138 kb on - strand at 3267.501 kb on - strand, within DvMF_2583 at 3267.643 kb on - strand, within DvMF_2583
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with methylglyoxal 0.0156 % remove 3,264,960 - DvMF_2581 0.42 -1.0 3,264,970 + DvMF_2581 0.43 -1.5 3,265,042 + DvMF_2581 0.51 +0.1 3,265,093 - DvMF_2581 0.56 -0.1 3,265,168 - DvMF_2581 0.63 -0.9 3,265,170 + DvMF_2581 0.64 -1.1 3,265,173 - DvMF_2581 0.64 -1.9 3,265,434 + -1.3 3,265,785 + +0.4 3,265,798 - -0.4 3,266,002 - DvMF_2582 0.12 -0.8 3,266,062 + DvMF_2582 0.18 -0.9 3,266,067 + DvMF_2582 0.19 -0.5 3,266,102 - DvMF_2582 0.22 -0.1 3,266,185 - DvMF_2582 0.30 -0.6 3,266,291 + DvMF_2582 0.40 -0.4 3,266,323 - DvMF_2582 0.43 -0.8 3,266,373 + DvMF_2582 0.47 -0.7 3,266,531 - DvMF_2582 0.62 -0.2 3,266,544 + DvMF_2582 0.63 -2.8 3,266,554 - DvMF_2582 0.64 -0.4 3,266,563 + DvMF_2582 0.65 -1.2 3,266,604 + DvMF_2582 0.69 -1.1 3,266,612 - DvMF_2582 0.70 -2.3 3,266,705 - DvMF_2582 0.78 -1.7 3,266,928 + -1.1 3,267,001 - -0.2 3,267,001 - -0.5 3,267,138 - -0.2 3,267,501 - DvMF_2583 0.22 -0.1 3,267,643 - DvMF_2583 0.45 -0.7
Or see this region's nucleotide sequence