Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2451 and DvMF_R0069 are separated by 198 nucleotides DvMF_R0069 and DvMF_2452 are separated by 398 nucleotides DvMF_2452 and DvMF_2453 are separated by 156 nucleotides
DvMF_2451: DvMF_2451 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase (RefSeq), at 3,088,361 to 3,089,614
_2451
DvMF_R0069: DvMF_R0069 - tRNA-His (RefSeq), at 3,089,813 to 3,089,888
_R0069
DvMF_2452: DvMF_2452 - multi-sensor hybrid histidine kinase (RefSeq), at 3,090,287 to 3,093,820
_2452
DvMF_2453: DvMF_2453 - integral membrane protein MviN (RefSeq), at 3,093,977 to 3,095,767
_2453
Position (kb)
3090
3091
3092
3093
3094 Strain fitness (log2 ratio)
-1
0
1
2 at 3089.679 kb on - strand at 3090.234 kb on - strand at 3090.274 kb on - strand at 3090.562 kb on + strand at 3090.965 kb on + strand, within DvMF_2452 at 3090.973 kb on - strand, within DvMF_2452 at 3090.995 kb on - strand, within DvMF_2452 at 3091.254 kb on - strand, within DvMF_2452 at 3091.521 kb on - strand, within DvMF_2452 at 3091.795 kb on + strand, within DvMF_2452 at 3092.095 kb on + strand, within DvMF_2452 at 3092.206 kb on - strand, within DvMF_2452 at 3092.224 kb on + strand, within DvMF_2452 at 3092.344 kb on - strand, within DvMF_2452 at 3092.353 kb on + strand, within DvMF_2452 at 3092.353 kb on + strand, within DvMF_2452 at 3092.361 kb on - strand, within DvMF_2452 at 3092.444 kb on + strand, within DvMF_2452 at 3092.507 kb on - strand, within DvMF_2452 at 3092.682 kb on + strand, within DvMF_2452 at 3092.807 kb on - strand, within DvMF_2452 at 3092.908 kb on + strand, within DvMF_2452 at 3092.991 kb on - strand, within DvMF_2452 at 3092.991 kb on - strand, within DvMF_2452 at 3093.283 kb on + strand, within DvMF_2452 at 3093.291 kb on - strand, within DvMF_2452 at 3093.433 kb on - strand, within DvMF_2452 at 3093.510 kb on + strand at 3093.518 kb on - strand at 3093.673 kb on + strand at 3093.744 kb on + strand at 3094.056 kb on - strand at 3094.079 kb on + strand at 3094.129 kb on - strand at 3094.178 kb on + strand, within DvMF_2453 at 3094.341 kb on - strand, within DvMF_2453 at 3094.612 kb on - strand, within DvMF_2453 at 3094.669 kb on + strand, within DvMF_2453 at 3094.723 kb on + strand, within DvMF_2453 at 3094.731 kb on - strand, within DvMF_2453 at 3094.781 kb on + strand, within DvMF_2453
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with methylglyoxal 0.0156 % remove 3,089,679 - -1.0 3,090,234 - -0.4 3,090,274 - -1.1 3,090,562 + +0.4 3,090,965 + DvMF_2452 0.19 -0.9 3,090,973 - DvMF_2452 0.19 -0.1 3,090,995 - DvMF_2452 0.20 -0.5 3,091,254 - DvMF_2452 0.27 +0.2 3,091,521 - DvMF_2452 0.35 -0.5 3,091,795 + DvMF_2452 0.43 -1.6 3,092,095 + DvMF_2452 0.51 -1.2 3,092,206 - DvMF_2452 0.54 +0.5 3,092,224 + DvMF_2452 0.55 -1.6 3,092,344 - DvMF_2452 0.58 -0.3 3,092,353 + DvMF_2452 0.58 +0.2 3,092,353 + DvMF_2452 0.58 -0.3 3,092,361 - DvMF_2452 0.59 -0.6 3,092,444 + DvMF_2452 0.61 +0.8 3,092,507 - DvMF_2452 0.63 +2.2 3,092,682 + DvMF_2452 0.68 -1.0 3,092,807 - DvMF_2452 0.71 -0.2 3,092,908 + DvMF_2452 0.74 -1.1 3,092,991 - DvMF_2452 0.77 -0.3 3,092,991 - DvMF_2452 0.77 +1.1 3,093,283 + DvMF_2452 0.85 -0.4 3,093,291 - DvMF_2452 0.85 -0.2 3,093,433 - DvMF_2452 0.89 +0.3 3,093,510 + -0.1 3,093,518 - -1.5 3,093,673 + -0.7 3,093,744 + +0.8 3,094,056 - -0.1 3,094,079 + -1.5 3,094,129 - -1.4 3,094,178 + DvMF_2453 0.11 -1.2 3,094,341 - DvMF_2453 0.20 -0.1 3,094,612 - DvMF_2453 0.35 -1.7 3,094,669 + DvMF_2453 0.39 -1.6 3,094,723 + DvMF_2453 0.42 +0.5 3,094,731 - DvMF_2453 0.42 -1.3 3,094,781 + DvMF_2453 0.45 -0.5
Or see this region's nucleotide sequence