Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2063
Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.0156 % |
---|---|---|---|---|---|
remove | |||||
2,557,485 | - | -1.2 | |||
2,557,525 | - | DvMF_2062 | 0.12 | -0.5 | |
2,557,529 | + | DvMF_2062 | 0.13 | -0.4 | |
2,557,594 | + | DvMF_2062 | 0.22 | -1.0 | |
2,557,632 | + | DvMF_2062 | 0.27 | -0.7 | |
2,557,657 | - | DvMF_2062 | 0.31 | -1.0 | |
2,557,664 | + | DvMF_2062 | 0.32 | +0.4 | |
2,557,771 | + | DvMF_2062 | 0.46 | +0.5 | |
2,557,962 | + | DvMF_2062 | 0.73 | -1.0 | |
2,558,154 | - | -0.1 | |||
2,558,558 | + | DvMF_2063 | 0.11 | -0.3 | |
2,558,585 | - | DvMF_2063 | 0.13 | -0.2 | |
2,558,654 | - | DvMF_2063 | 0.19 | -1.8 | |
2,558,758 | - | DvMF_2063 | 0.28 | +0.0 | |
2,558,841 | - | DvMF_2063 | 0.35 | -1.6 | |
2,558,866 | + | DvMF_2063 | 0.37 | -0.7 | |
2,558,866 | + | DvMF_2063 | 0.37 | -0.8 | |
2,558,874 | - | DvMF_2063 | 0.37 | -0.6 | |
2,558,959 | - | DvMF_2063 | 0.45 | -1.3 | |
2,559,210 | + | DvMF_2063 | 0.66 | -4.0 | |
2,559,270 | - | DvMF_2063 | 0.71 | -0.9 | |
2,559,614 | - | -0.6 | |||
2,559,924 | + | DvMF_2064 | 0.28 | -1.6 | |
2,559,983 | - | DvMF_2064 | 0.41 | -1.0 | |
2,560,352 | - | +0.6 | |||
2,560,401 | - | -0.1 | |||
2,560,512 | + | -0.0 | |||
2,560,608 | - | DvMF_2065 | 0.27 | -1.5 |
Or see this region's nucleotide sequence