Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1881 and DvMF_1882 are separated by 267 nucleotides DvMF_1882 and DvMF_1883 overlap by 8 nucleotides DvMF_1883 and DvMF_R0051 are separated by 570 nucleotides
DvMF_1881: DvMF_1881 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,315,847 to 2,317,625
_1881
DvMF_1882: DvMF_1882 - acetolactate synthase 1 regulatory subunit (RefSeq), at 2,317,893 to 2,318,258
_1882
DvMF_1883: DvMF_1883 - acetolactate synthase catalytic subunit (RefSeq), at 2,318,251 to 2,320,098
_1883
DvMF_R0051: DvMF_R0051 - tRNA-Thr (RefSeq), at 2,320,669 to 2,320,744
_R0051
Position (kb)
2318
2319
2320
2321 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2317.326 kb on + strand, within DvMF_1881 at 2317.336 kb on - strand, within DvMF_1881 at 2317.584 kb on - strand at 2317.944 kb on + strand, within DvMF_1882 at 2318.170 kb on + strand, within DvMF_1882 at 2318.436 kb on - strand, within DvMF_1883 at 2318.519 kb on - strand, within DvMF_1883 at 2318.558 kb on + strand, within DvMF_1883 at 2318.561 kb on - strand, within DvMF_1883 at 2318.566 kb on - strand, within DvMF_1883 at 2318.579 kb on + strand, within DvMF_1883 at 2318.724 kb on - strand, within DvMF_1883 at 2318.783 kb on + strand, within DvMF_1883 at 2318.792 kb on - strand, within DvMF_1883 at 2318.828 kb on + strand, within DvMF_1883 at 2318.828 kb on + strand, within DvMF_1883 at 2318.836 kb on - strand, within DvMF_1883 at 2318.836 kb on - strand, within DvMF_1883 at 2318.836 kb on - strand, within DvMF_1883 at 2318.836 kb on - strand, within DvMF_1883 at 2318.836 kb on - strand, within DvMF_1883 at 2318.921 kb on - strand, within DvMF_1883 at 2318.956 kb on + strand, within DvMF_1883 at 2319.055 kb on + strand, within DvMF_1883 at 2319.080 kb on + strand, within DvMF_1883 at 2319.157 kb on - strand, within DvMF_1883 at 2319.172 kb on - strand, within DvMF_1883 at 2319.318 kb on + strand, within DvMF_1883 at 2319.331 kb on - strand, within DvMF_1883 at 2319.367 kb on - strand, within DvMF_1883 at 2319.367 kb on - strand, within DvMF_1883 at 2319.381 kb on + strand, within DvMF_1883 at 2319.445 kb on + strand, within DvMF_1883 at 2319.699 kb on + strand, within DvMF_1883 at 2320.092 kb on - strand at 2320.137 kb on - strand at 2320.618 kb on + strand at 2320.729 kb on - strand, within DvMF_R0051 at 2320.729 kb on - strand, within DvMF_R0051 at 2320.975 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with methylglyoxal 0.0156 % remove 2,317,326 + DvMF_1881 0.83 +0.3 2,317,336 - DvMF_1881 0.84 +0.1 2,317,584 - -2.3 2,317,944 + DvMF_1882 0.14 -2.8 2,318,170 + DvMF_1882 0.76 -3.5 2,318,436 - DvMF_1883 0.10 +0.0 2,318,519 - DvMF_1883 0.15 -1.1 2,318,558 + DvMF_1883 0.17 +0.0 2,318,561 - DvMF_1883 0.17 +0.5 2,318,566 - DvMF_1883 0.17 -0.7 2,318,579 + DvMF_1883 0.18 -0.7 2,318,724 - DvMF_1883 0.26 +0.2 2,318,783 + DvMF_1883 0.29 -0.5 2,318,792 - DvMF_1883 0.29 +0.7 2,318,828 + DvMF_1883 0.31 -0.9 2,318,828 + DvMF_1883 0.31 -0.9 2,318,836 - DvMF_1883 0.32 -0.2 2,318,836 - DvMF_1883 0.32 +0.0 2,318,836 - DvMF_1883 0.32 -0.8 2,318,836 - DvMF_1883 0.32 -1.6 2,318,836 - DvMF_1883 0.32 -0.1 2,318,921 - DvMF_1883 0.36 -2.6 2,318,956 + DvMF_1883 0.38 +0.0 2,319,055 + DvMF_1883 0.44 -0.4 2,319,080 + DvMF_1883 0.45 -0.5 2,319,157 - DvMF_1883 0.49 -0.8 2,319,172 - DvMF_1883 0.50 -1.0 2,319,318 + DvMF_1883 0.58 -0.2 2,319,331 - DvMF_1883 0.58 -0.7 2,319,367 - DvMF_1883 0.60 -0.6 2,319,367 - DvMF_1883 0.60 -1.2 2,319,381 + DvMF_1883 0.61 -0.1 2,319,445 + DvMF_1883 0.65 -0.7 2,319,699 + DvMF_1883 0.78 -1.2 2,320,092 - -0.5 2,320,137 - -0.6 2,320,618 + -1.9 2,320,729 - DvMF_R0051 0.79 -1.6 2,320,729 - DvMF_R0051 0.79 +0.5 2,320,975 + -3.2
Or see this region's nucleotide sequence