Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1768 and DvMF_1769 are separated by 2 nucleotides DvMF_1769 and DvMF_1770 are separated by 72 nucleotides DvMF_1770 and DvMF_1771 are separated by 125 nucleotides DvMF_1771 and DvMF_1772 are separated by 86 nucleotides
DvMF_1768: DvMF_1768 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,164,469 to 2,166,199
_1768
DvMF_1769: DvMF_1769 - response regulator receiver protein (RefSeq), at 2,166,202 to 2,166,591
_1769
DvMF_1770: DvMF_1770 - hypothetical protein (RefSeq), at 2,166,664 to 2,167,398
_1770
DvMF_1771: DvMF_1771 - hypothetical protein (RefSeq), at 2,167,524 to 2,167,814
_1771
DvMF_1772: DvMF_1772 - response regulator receiver protein (RefSeq), at 2,167,901 to 2,168,356
_1772
Position (kb)
2166
2167
2168 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2165.664 kb on - strand, within DvMF_1768 at 2165.742 kb on - strand, within DvMF_1768 at 2166.026 kb on - strand, within DvMF_1768 at 2166.341 kb on + strand, within DvMF_1769 at 2166.815 kb on - strand, within DvMF_1770 at 2166.817 kb on + strand, within DvMF_1770 at 2166.845 kb on - strand, within DvMF_1770 at 2166.845 kb on - strand, within DvMF_1770 at 2167.061 kb on + strand, within DvMF_1770 at 2167.063 kb on - strand, within DvMF_1770 at 2167.900 kb on + strand at 2168.096 kb on + strand, within DvMF_1772 at 2168.237 kb on - strand, within DvMF_1772 at 2168.303 kb on - strand, within DvMF_1772
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with methylglyoxal 0.0156 % remove 2,165,664 - DvMF_1768 0.69 -0.6 2,165,742 - DvMF_1768 0.74 +0.2 2,166,026 - DvMF_1768 0.90 -3.8 2,166,341 + DvMF_1769 0.36 -1.3 2,166,815 - DvMF_1770 0.21 -2.6 2,166,817 + DvMF_1770 0.21 -0.9 2,166,845 - DvMF_1770 0.25 -0.5 2,166,845 - DvMF_1770 0.25 -1.7 2,167,061 + DvMF_1770 0.54 -1.3 2,167,063 - DvMF_1770 0.54 -0.5 2,167,900 + -1.5 2,168,096 + DvMF_1772 0.43 -0.8 2,168,237 - DvMF_1772 0.74 +0.2 2,168,303 - DvMF_1772 0.88 -0.2
Or see this region's nucleotide sequence