Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1623
Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.0156 % |
|---|---|---|---|---|---|
| remove | |||||
| 2,000,429 | + | DvMF_1622 | 0.25 | -0.8 | |
| 2,000,482 | - | DvMF_1622 | 0.31 | -0.8 | |
| 2,000,633 | + | DvMF_1622 | 0.48 | -0.3 | |
| 2,001,369 | + | -2.5 | |||
| 2,001,396 | + | -0.7 | |||
| 2,001,447 | + | DvMF_1623 | 0.18 | +0.8 | |
| 2,001,678 | - | DvMF_1623 | 0.56 | +0.4 | |
| 2,001,694 | + | DvMF_1623 | 0.58 | -1.1 | |
| 2,001,701 | + | DvMF_1623 | 0.59 | -0.4 | |
| 2,001,747 | - | DvMF_1623 | 0.67 | -0.4 | |
| 2,001,788 | - | DvMF_1623 | 0.74 | -0.5 | |
| 2,002,422 | - | DvMF_1624 | 0.22 | -0.1 | |
| 2,002,467 | - | DvMF_1624 | 0.28 | -0.6 | |
| 2,002,675 | + | DvMF_1624 | 0.52 | +0.4 | |
| 2,002,751 | - | DvMF_1624 | 0.62 | -1.0 | |
| 2,002,769 | - | DvMF_1624 | 0.64 | -0.8 | |
| 2,002,854 | + | DvMF_1624 | 0.74 | -0.6 | |
| 2,002,860 | - | DvMF_1624 | 0.75 | -0.6 | |
| 2,002,860 | - | DvMF_1624 | 0.75 | -0.4 |
Or see this region's nucleotide sequence