Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1435
Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.0156 % |
---|---|---|---|---|---|
remove | |||||
1,756,865 | + | DvMF_1434 | 0.70 | -1.7 | |
1,756,909 | - | DvMF_1434 | 0.73 | -1.1 | |
1,756,909 | - | DvMF_1434 | 0.73 | +1.0 | |
1,756,990 | + | DvMF_1434 | 0.79 | -0.5 | |
1,756,998 | - | DvMF_1434 | 0.79 | -1.0 | |
1,757,068 | + | DvMF_1434 | 0.84 | -2.1 | |
1,757,068 | + | DvMF_1434 | 0.84 | -0.6 | |
1,757,317 | + | -0.1 | |||
1,757,567 | - | -0.1 | |||
1,757,605 | + | +0.3 | |||
1,757,630 | - | -1.1 | |||
1,757,834 | - | DvMF_1435 | 0.54 | -1.4 | |
1,757,894 | + | DvMF_1435 | 0.67 | -1.0 | |
1,758,077 | - | -0.2 | |||
1,758,077 | - | -0.6 | |||
1,758,160 | + | -0.6 | |||
1,758,243 | + | -1.0 | |||
1,758,274 | - | -0.7 | |||
1,758,388 | + | -0.2 | |||
1,758,513 | + | DvMF_1436 | 0.19 | -1.3 | |
1,758,622 | - | DvMF_1436 | 0.31 | -0.3 | |
1,758,626 | - | DvMF_1436 | 0.32 | -0.3 | |
1,758,633 | + | DvMF_1436 | 0.32 | -0.9 | |
1,758,641 | - | DvMF_1436 | 0.33 | -3.0 | |
1,758,684 | - | DvMF_1436 | 0.38 | -0.5 | |
1,758,819 | - | DvMF_1436 | 0.53 | -0.3 | |
1,758,835 | + | DvMF_1436 | 0.55 | -0.9 |
Or see this region's nucleotide sequence