Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1326 and DvMF_1327 are separated by 362 nucleotides DvMF_1327 and DvMF_1328 are separated by 145 nucleotides DvMF_1328 and DvMF_1329 are separated by 290 nucleotides
DvMF_1326: DvMF_1326 - protein of unknown function DUF52 (RefSeq), at 1,621,300 to 1,622,148
_1326
DvMF_1327: DvMF_1327 - hypothetical protein (RefSeq), at 1,622,511 to 1,623,554
_1327
DvMF_1328: DvMF_1328 - heavy metal-binding domain-containing protein (RefSeq), at 1,623,700 to 1,623,909
_1328
DvMF_1329: DvMF_1329 - hypothetical protein (RefSeq), at 1,624,200 to 1,624,493
_1329
Position (kb)
1622
1623
1624 Strain fitness (log2 ratio)
-2
-1
0
1 at 1621.539 kb on + strand, within DvMF_1326 at 1621.547 kb on - strand, within DvMF_1326 at 1621.706 kb on + strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.750 kb on - strand, within DvMF_1326 at 1621.785 kb on + strand, within DvMF_1326 at 1621.835 kb on + strand, within DvMF_1326 at 1621.958 kb on - strand, within DvMF_1326 at 1622.028 kb on + strand, within DvMF_1326 at 1622.222 kb on - strand at 1622.288 kb on + strand at 1622.363 kb on - strand at 1623.040 kb on + strand, within DvMF_1327 at 1623.291 kb on + strand, within DvMF_1327 at 1623.326 kb on - strand, within DvMF_1327 at 1623.477 kb on - strand at 1623.744 kb on - strand, within DvMF_1328 at 1623.887 kb on + strand, within DvMF_1328 at 1624.094 kb on - strand at 1624.126 kb on + strand at 1624.250 kb on - strand, within DvMF_1329 at 1624.349 kb on + strand, within DvMF_1329 at 1624.414 kb on - strand, within DvMF_1329 at 1624.450 kb on - strand, within DvMF_1329 at 1624.512 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with methylglyoxal 0.0156 % remove 1,621,539 + DvMF_1326 0.28 -0.2 1,621,547 - DvMF_1326 0.29 -0.7 1,621,706 + DvMF_1326 0.48 -0.7 1,621,714 - DvMF_1326 0.49 -1.5 1,621,714 - DvMF_1326 0.49 -0.9 1,621,714 - DvMF_1326 0.49 +0.6 1,621,750 - DvMF_1326 0.53 -0.1 1,621,785 + DvMF_1326 0.57 -1.8 1,621,835 + DvMF_1326 0.63 +0.1 1,621,958 - DvMF_1326 0.78 -1.5 1,622,028 + DvMF_1326 0.86 -1.0 1,622,222 - -1.2 1,622,288 + +0.2 1,622,363 - -0.5 1,623,040 + DvMF_1327 0.51 -0.7 1,623,291 + DvMF_1327 0.75 +0.1 1,623,326 - DvMF_1327 0.78 -0.9 1,623,477 - -0.7 1,623,744 - DvMF_1328 0.21 -0.8 1,623,887 + DvMF_1328 0.89 -1.0 1,624,094 - -0.4 1,624,126 + -0.6 1,624,250 - DvMF_1329 0.17 +0.9 1,624,349 + DvMF_1329 0.51 -0.8 1,624,414 - DvMF_1329 0.73 -1.5 1,624,450 - DvMF_1329 0.85 -0.8 1,624,512 + -0.2
Or see this region's nucleotide sequence