Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1314
Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.0156 % |
---|---|---|---|---|---|
remove | |||||
1,604,440 | - | -0.8 | |||
1,604,510 | + | -0.1 | |||
1,604,535 | + | -0.6 | |||
1,604,625 | + | -0.8 | |||
1,604,660 | - | -0.9 | |||
1,604,914 | + | DvMF_1314 | 0.12 | -0.5 | |
1,604,963 | - | DvMF_1314 | 0.15 | -0.3 | |
1,605,222 | + | DvMF_1314 | 0.33 | +0.5 | |
1,605,306 | + | DvMF_1314 | 0.39 | -0.9 | |
1,605,424 | + | DvMF_1314 | 0.47 | -2.3 | |
1,605,562 | - | DvMF_1314 | 0.56 | -0.6 | |
1,605,758 | - | DvMF_1314 | 0.70 | -0.7 | |
1,606,110 | + | -0.5 | |||
1,606,124 | + | -2.1 | |||
1,606,134 | + | -0.4 | |||
1,606,149 | + | -0.9 | |||
1,606,636 | - | DvMF_1315 | 0.13 | -0.7 | |
1,606,641 | - | DvMF_1315 | 0.14 | -2.1 | |
1,606,684 | + | DvMF_1315 | 0.17 | -0.2 | |
1,606,721 | + | DvMF_1315 | 0.21 | -0.6 | |
1,606,729 | - | DvMF_1315 | 0.21 | -0.1 | |
1,606,985 | - | DvMF_1315 | 0.43 | -0.9 |
Or see this region's nucleotide sequence