Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1213 and DvMF_1214 are separated by 287 nucleotides DvMF_1214 and DvMF_1215 are separated by 879 nucleotides
DvMF_1213: DvMF_1213 - sigma54 specific transcriptional regulator, Fis family (RefSeq), at 1,491,817 to 1,493,421
_1213
DvMF_1214: DvMF_1214 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 1,493,709 to 1,495,361
_1214
DvMF_1215: DvMF_1215 - molybdopterin-guanine dinucleotide biosynthesis protein B (RefSeq), at 1,496,241 to 1,496,951
_1215
Position (kb)
1493
1494
1495
1496 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1492.870 kb on + strand, within DvMF_1213 at 1492.870 kb on + strand, within DvMF_1213 at 1492.989 kb on - strand, within DvMF_1213 at 1493.078 kb on - strand, within DvMF_1213 at 1493.393 kb on + strand at 1493.406 kb on - strand at 1493.820 kb on - strand at 1494.007 kb on + strand, within DvMF_1214 at 1494.077 kb on + strand, within DvMF_1214 at 1494.127 kb on - strand, within DvMF_1214 at 1494.578 kb on - strand, within DvMF_1214 at 1495.038 kb on + strand, within DvMF_1214 at 1495.217 kb on + strand at 1495.355 kb on + strand at 1495.451 kb on + strand at 1495.503 kb on + strand at 1495.612 kb on + strand at 1495.805 kb on - strand at 1495.811 kb on - strand at 1495.842 kb on - strand at 1496.305 kb on + strand at 1496.313 kb on - strand, within DvMF_1215 at 1496.315 kb on - strand, within DvMF_1215
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with methylglyoxal 0.0156 % remove 1,492,870 + DvMF_1213 0.66 -0.7 1,492,870 + DvMF_1213 0.66 -1.3 1,492,989 - DvMF_1213 0.73 +0.5 1,493,078 - DvMF_1213 0.79 -0.9 1,493,393 + -1.4 1,493,406 - -0.1 1,493,820 - -1.5 1,494,007 + DvMF_1214 0.18 -0.7 1,494,077 + DvMF_1214 0.22 +0.1 1,494,127 - DvMF_1214 0.25 -0.4 1,494,578 - DvMF_1214 0.53 +0.5 1,495,038 + DvMF_1214 0.80 +0.6 1,495,217 + +0.1 1,495,355 + -1.3 1,495,451 + -0.7 1,495,503 + -3.3 1,495,612 + -0.0 1,495,805 - -0.2 1,495,811 - -0.7 1,495,842 - -0.6 1,496,305 + +2.9 1,496,313 - DvMF_1215 0.10 -0.5 1,496,315 - DvMF_1215 0.10 -0.9
Or see this region's nucleotide sequence