Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1078
Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.0156 % |
---|---|---|---|---|---|
remove | |||||
1,318,070 | - | DvMF_1077 | 0.68 | -3.6 | |
1,318,373 | + | -0.5 | |||
1,318,378 | + | -0.6 | |||
1,318,413 | - | -0.7 | |||
1,318,508 | - | +0.6 | |||
1,318,701 | - | -1.2 | |||
1,318,970 | + | DvMF_1078 | 0.33 | -1.1 | |
1,319,042 | - | DvMF_1078 | 0.46 | -0.2 | |
1,319,084 | + | DvMF_1078 | 0.54 | +0.6 | |
1,319,106 | - | DvMF_1078 | 0.58 | +1.1 | |
1,319,108 | + | DvMF_1078 | 0.58 | -1.7 | |
1,319,298 | - | +0.6 | |||
1,319,306 | + | -0.1 | |||
1,319,478 | + | DvMF_1079 | 0.42 | -0.9 | |
1,319,735 | + | -1.6 | |||
1,319,814 | - | -0.8 | |||
1,319,908 | + | DvMF_1080 | 0.10 | +0.3 | |
1,319,982 | - | DvMF_1080 | 0.20 | -0.5 | |
1,320,016 | - | DvMF_1080 | 0.24 | -2.8 | |
1,320,065 | - | DvMF_1080 | 0.31 | -0.5 | |
1,320,110 | + | DvMF_1080 | 0.37 | -0.5 | |
1,320,110 | + | DvMF_1080 | 0.37 | -1.0 | |
1,320,146 | - | DvMF_1080 | 0.41 | -1.9 | |
1,320,232 | - | DvMF_1080 | 0.52 | -0.9 | |
1,320,233 | - | DvMF_1080 | 0.53 | -0.4 |
Or see this region's nucleotide sequence