Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0871
Experiment: MoYLS4 with methylglyoxal 0.0156 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with methylglyoxal 0.0156 % |
---|---|---|---|---|---|
remove | |||||
1,048,839 | + | DvMF_0870 | 0.67 | -0.3 | |
1,048,873 | + | DvMF_0870 | 0.68 | -0.5 | |
1,048,916 | - | DvMF_0870 | 0.70 | -0.2 | |
1,048,968 | - | DvMF_0870 | 0.72 | -0.4 | |
1,049,137 | - | DvMF_0870 | 0.80 | -0.4 | |
1,049,240 | + | DvMF_0870 | 0.84 | -0.2 | |
1,049,240 | + | DvMF_0870 | 0.84 | -0.1 | |
1,049,248 | - | DvMF_0870 | 0.85 | -1.7 | |
1,049,515 | + | +0.8 | |||
1,049,829 | - | +2.6 | |||
1,049,845 | + | -1.6 | |||
1,049,954 | - | +0.4 | |||
1,049,954 | - | +0.1 | |||
1,050,310 | - | DvMF_0871 | 0.21 | -1.3 | |
1,050,658 | + | DvMF_0871 | 0.34 | -0.2 | |
1,050,673 | + | DvMF_0871 | 0.35 | +0.2 | |
1,050,772 | - | DvMF_0871 | 0.39 | +0.8 | |
1,050,887 | + | DvMF_0871 | 0.43 | -0.1 | |
1,050,895 | - | DvMF_0871 | 0.44 | -0.2 | |
1,051,186 | + | DvMF_0871 | 0.55 | -0.8 | |
1,051,279 | + | DvMF_0871 | 0.58 | -0.1 | |
1,051,295 | - | DvMF_0871 | 0.59 | -0.6 | |
1,051,318 | + | DvMF_0871 | 0.60 | -1.2 | |
1,052,122 | - | -0.1 | |||
1,052,136 | + | -0.6 | |||
1,052,154 | + | -0.5 | |||
1,052,725 | - | DvMF_0872 | 0.81 | -3.7 | |
1,052,758 | - | -0.8 | |||
1,052,995 | + | -0.6 | |||
1,053,027 | + | -0.5 | |||
1,053,275 | + | DvMF_0873 | 0.34 | -1.2 | |
1,053,327 | + | DvMF_0873 | 0.46 | -0.8 | |
1,053,364 | - | DvMF_0873 | 0.54 | -0.4 |
Or see this region's nucleotide sequence