Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0792

Experiment: MoYLS4 with methylglyoxal 0.0156 %

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0791 and DvMF_0792 are separated by 753 nucleotidesDvMF_0792 and DvMF_0793 are separated by 49 nucleotides DvMF_0791: DvMF_0791 - no description, at 953,048 to 954,794 _0791 DvMF_0792: DvMF_0792 - CheW protein (RefSeq), at 955,548 to 956,042 _0792 DvMF_0793: DvMF_0793 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 956,092 to 957,840 _0793 Position (kb) 955 956 957Strain fitness (log2 ratio) -3 -2 -1 0 1at 955.077 kb on + strandat 955.156 kb on + strandat 955.372 kb on - strandat 955.382 kb on - strandat 955.405 kb on - strandat 955.970 kb on + strand, within DvMF_0792at 956.012 kb on - strandat 956.212 kb on - strandat 956.212 kb on - strandat 956.626 kb on + strand, within DvMF_0793at 956.731 kb on - strand, within DvMF_0793at 956.899 kb on + strand, within DvMF_0793at 956.906 kb on + strand, within DvMF_0793at 957.023 kb on - strand, within DvMF_0793

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with methylglyoxal 0.0156 %
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955,077 + +0.6
955,156 + -0.3
955,372 - -0.7
955,382 - -0.9
955,405 - -1.3
955,970 + DvMF_0792 0.85 -1.4
956,012 - -0.1
956,212 - -0.6
956,212 - -2.8
956,626 + DvMF_0793 0.31 -0.9
956,731 - DvMF_0793 0.37 -0.9
956,899 + DvMF_0793 0.46 -1.4
956,906 + DvMF_0793 0.47 -1.5
957,023 - DvMF_0793 0.53 -0.8

Or see this region's nucleotide sequence