Strain Fitness in Shewanella loihica PV-4 around Shew_3388

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,036,994	+		Shew_3387	0.14	+0.2
4,037,563	-		Shew_3387	0.76	+0.2
4,037,568	+		Shew_3387	0.76	-2.0
4,037,585	+		Shew_3387	0.78	+0.1
4,037,625	-		Shew_3387	0.82	-0.5
4,037,676	+		Shew_3387	0.88	-0.0
4,037,683	-		Shew_3387	0.89	+0.0
4,037,683	-		Shew_3387	0.89	-0.1
4,037,711	-				+0.0
4,037,823	-				+0.7
4,037,823	-				+0.1
4,037,830	+				+0.2
4,038,122	+		Shew_3388	0.66	-0.6
4,038,312	+				-0.3
4,038,617	-				+0.1
4,038,969	-		Shew_3389	0.52	+0.5
4,039,229	-		Shew_3389	0.86	+0.4