Strain Fitness in Shewanella loihica PV-4 around Shew_3261

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,898,543	+		Shew_3260	0.15	+0.2
3,898,713	-		Shew_3260	0.32	+0.1
3,899,114	+		Shew_3260	0.71	+0.8
3,899,165	+		Shew_3260	0.76	+0.4
3,899,165	+		Shew_3260	0.76	+0.2
3,899,173	-		Shew_3260	0.76	+0.8
3,899,182	+		Shew_3260	0.77	-0.4
3,899,392	-				+0.5
3,899,710	+		Shew_3261	0.28	-0.2
3,899,860	+		Shew_3261	0.51	-0.3
3,899,860	+		Shew_3261	0.51	+0.1
3,899,879	+		Shew_3261	0.54	-0.5
3,900,228	-				+0.3
3,900,278	-				+0.0
3,900,504	-		Shew_3262	0.63	+0.4
3,900,654	-				+0.2
3,900,715	+				+0.2
3,900,872	-				+0.0
3,900,872	-				+0.2
3,900,913	+				+0.0
3,901,012	-				-0.2
3,901,066	+		Shew_3263	0.12	-0.0
3,901,072	-		Shew_3263	0.13	-0.5
3,901,118	-		Shew_3263	0.15	+0.2
3,901,118	+		Shew_3263	0.15	-0.1
3,901,149	+		Shew_3263	0.17	+0.4
3,901,150	+		Shew_3263	0.17	+0.3