Strain Fitness in Rhodospirillum rubrum S1H around Rru_AR0019

Experiment: L-Malic Acid (C) and N2; anaerobic; high light

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRru_AR0018 and Rru_AR0019 are separated by 182 nucleotidesRru_AR0019 and Rru_AR0020 are separated by 66 nucleotidesRru_AR0020 and Rru_AR0021 are separated by 361 nucleotides Rru_AR0018: Rru_AR0018 - 16S ribosomal RNA (NCBI), at 911,398 to 912,874 _AR0018 Rru_AR0019: Rru_AR0019 - tRNA-Ile (NCBI), at 913,057 to 913,133 _AR0019 Rru_AR0020: Rru_AR0020 - tRNA-Ala (NCBI), at 913,200 to 913,275 _AR0020 Rru_AR0021: Rru_AR0021 - 23S ribosomal RNA (NCBI), at 913,637 to 916,394 _AR0021 Position (kb) 913 914Strain fitness (log2 ratio) -1 0 1at 913.460 kb on - strandat 913.580 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Malic Acid (C) and N2; anaerobic; high light
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913,460 - -0.5
913,580 + -1.4

Or see this region's nucleotide sequence