Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27650

Experiment: Growth at pH8 and (C) D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at pH8 and (C) D-Glucose
6,152,363	+		PFLU_RS27645	0.33	-2.0
6,152,363	+		PFLU_RS27645	0.33	-1.3
6,152,363	+		PFLU_RS27645	0.33	-2.2
6,152,363	+		PFLU_RS27645	0.33	-3.6
6,152,363	+		PFLU_RS27645	0.33	-2.7
6,152,363	+		PFLU_RS27645	0.33	-3.2
6,152,363	+		PFLU_RS27645	0.33	-0.7
6,152,363	+		PFLU_RS27645	0.33	-2.4
6,152,363	+		PFLU_RS27645	0.33	-3.6
6,152,363	+		PFLU_RS27645	0.33	-3.3
6,152,363	+		PFLU_RS27645	0.33	-2.0
6,152,363	+		PFLU_RS27645	0.33	-2.9
6,152,363	+		PFLU_RS27645	0.33	-3.3
6,152,363	+		PFLU_RS27645	0.33	-1.6
6,152,363	+		PFLU_RS27645	0.33	-1.3
6,152,363	+		PFLU_RS27645	0.33	-2.7
6,152,363	+		PFLU_RS27645	0.33	-2.5
6,152,363	+		PFLU_RS27645	0.33	-0.2
6,152,363	+		PFLU_RS27645	0.33	-2.4
6,152,363	+		PFLU_RS27645	0.33	-1.3
6,152,363	+		PFLU_RS27645	0.33	-2.4
6,152,364	-		PFLU_RS27645	0.33	-2.0
6,152,364	-		PFLU_RS27645	0.33	-1.5
6,152,364	-		PFLU_RS27645	0.33	-1.0
6,152,364	-		PFLU_RS27645	0.33	-0.3
6,152,364	-		PFLU_RS27645	0.33	-1.1
6,152,364	-		PFLU_RS27645	0.33	-1.5
6,152,364	-		PFLU_RS27645	0.33	-1.1
6,152,364	-		PFLU_RS27645	0.33	-1.3
6,152,364	-		PFLU_RS27645	0.33	-1.5
6,152,364	-		PFLU_RS27645	0.33	-2.6
6,152,364	-		PFLU_RS27645	0.33	-2.6
6,152,364	-		PFLU_RS27645	0.33	-3.2
6,152,364	-		PFLU_RS27645	0.33	-2.7
6,152,364	-		PFLU_RS27645	0.33	-3.0
6,152,364	-		PFLU_RS27645	0.33	-1.7
6,152,364	-		PFLU_RS27645	0.33	-0.7
6,152,364	-		PFLU_RS27645	0.33	-3.3
6,152,364	-		PFLU_RS27645	0.33	-2.9
6,152,369	+		PFLU_RS27645	0.34	-3.9
6,152,369	+		PFLU_RS27645	0.34	-2.4
6,152,369	+		PFLU_RS27645	0.34	-1.9
6,152,369	+		PFLU_RS27645	0.34	-0.3
6,152,369	+		PFLU_RS27645	0.34	-1.4
6,152,369	+		PFLU_RS27645	0.34	-0.8
6,152,370	-		PFLU_RS27645	0.34	-0.5
6,152,370	-		PFLU_RS27645	0.34	-3.2
6,152,370	-		PFLU_RS27645	0.34	-0.8
6,152,370	-		PFLU_RS27645	0.34	-3.8
6,152,370	-		PFLU_RS27645	0.34	-2.3
6,152,370	-		PFLU_RS27645	0.34	+1.4
6,152,370	-		PFLU_RS27645	0.34	-2.4
6,152,420	-		PFLU_RS27645	0.38	-2.3
6,152,655	+		PFLU_RS27645	0.58	-1.5
6,152,655	+		PFLU_RS27645	0.58	-2.7
6,152,655	+		PFLU_RS27645	0.58	-1.4
6,152,656	-		PFLU_RS27645	0.58	+0.3
6,152,711	+		PFLU_RS27645	0.63	+1.3
6,152,711	+		PFLU_RS27645	0.63	-1.5
6,152,711	+		PFLU_RS27645	0.63	-2.2
6,152,711	+		PFLU_RS27645	0.63	-2.0
6,152,711	+		PFLU_RS27645	0.63	-1.8
6,152,712	-		PFLU_RS27645	0.63	+0.5
6,152,712	-		PFLU_RS27645	0.63	-2.2
6,152,712	-		PFLU_RS27645	0.63	-2.2
6,152,712	-		PFLU_RS27645	0.63	-2.4
6,152,712	-		PFLU_RS27645	0.63	-0.0
6,152,712	-		PFLU_RS27645	0.63	-2.9
6,152,712	-		PFLU_RS27645	0.63	-1.4
6,152,787	+		PFLU_RS27645	0.69	-0.5
6,152,834	+		PFLU_RS27645	0.73	-3.0
6,152,834	+		PFLU_RS27645	0.73	-2.2
6,152,834	+		PFLU_RS27645	0.73	-3.1
6,152,834	+		PFLU_RS27645	0.73	-1.7
6,152,834	+		PFLU_RS27645	0.73	-1.0
6,152,834	+		PFLU_RS27645	0.73	+1.0
6,152,834	+		PFLU_RS27645	0.73	+0.8
6,152,835	-		PFLU_RS27645	0.73	-3.4
6,152,835	-		PFLU_RS27645	0.73	+2.0
6,152,835	-		PFLU_RS27645	0.73	-1.9
6,152,835	-		PFLU_RS27645	0.73	-4.1
6,152,835	-		PFLU_RS27645	0.73	-2.3
6,152,835	-		PFLU_RS27645	0.73	-0.3
6,152,835	-		PFLU_RS27645	0.73	-2.5
6,152,835	-		PFLU_RS27645	0.73	-3.5
6,152,835	-		PFLU_RS27645	0.73	-1.8
6,152,845	-		PFLU_RS27645	0.74	-3.2
6,152,845	-		PFLU_RS27645	0.74	-2.6
6,152,845	-		PFLU_RS27645	0.74	-1.8
6,152,871	+		PFLU_RS27645	0.76	-2.7
6,152,871	+		PFLU_RS27645	0.76	-0.8
6,152,910	+		PFLU_RS27645	0.79	-1.1
6,152,911	-		PFLU_RS27645	0.79	-2.2
6,152,911	-		PFLU_RS27645	0.79	-3.4
6,152,911	-		PFLU_RS27645	0.79	-2.5
6,152,911	-		PFLU_RS27645	0.79	-0.7
6,152,911	-		PFLU_RS27645	0.79	-2.8
6,153,014	+		PFLU_RS27645	0.88	-1.9
6,153,014	+		PFLU_RS27645	0.88	-3.1
6,153,015	-		PFLU_RS27645	0.88	-0.4
6,153,015	-		PFLU_RS27645	0.88	-3.2
6,153,015	-		PFLU_RS27645	0.88	+0.0
6,153,015	-		PFLU_RS27645	0.88	+0.0
6,153,015	-		PFLU_RS27645	0.88	-1.3
6,153,101	+				-3.1
6,153,101	+				-1.7
6,153,166	+				+0.9
6,153,177	+				-2.0
6,153,177	+				-3.2
6,153,177	+				+1.6
6,153,177	+				-0.3
6,153,177	+				-3.2
6,153,177	+				-2.4
6,153,177	+				+0.3
6,153,177	+				+1.0
6,153,177	+				+0.6
6,153,177	+				-2.5
6,153,178	-				+1.0
6,153,178	-				+0.5
6,153,178	-				-0.1
6,153,178	-				+0.2
6,153,178	-				+1.2
6,153,178	-				-3.1
6,153,178	-				+1.2
6,153,178	-				-0.3
6,153,178	-				-1.3
6,153,178	-				-0.3
6,153,178	-				+1.5
6,153,178	-				-0.4
6,153,178	-				+2.0
6,153,178	-				-1.2
6,153,185	-				-0.6
6,153,346	+				+0.5
6,153,346	+				-0.4
6,153,347	-				+1.7
6,153,347	-				+1.0
6,153,347	-				+1.8
6,153,347	-				+0.7
6,153,347	-				+2.3
6,153,591	+		PFLU_RS27650	0.25	-0.6
6,153,591	+		PFLU_RS27650	0.25	-2.3
6,153,591	+		PFLU_RS27650	0.25	-2.6
6,153,591	+		PFLU_RS27650	0.25	-1.3
6,153,591	+		PFLU_RS27650	0.25	-0.7
6,153,591	+		PFLU_RS27650	0.25	-1.0
6,153,591	+		PFLU_RS27650	0.25	-0.8
6,153,591	+		PFLU_RS27650	0.25	-2.9
6,153,591	+		PFLU_RS27650	0.25	-2.0
6,153,591	+		PFLU_RS27650	0.25	-3.5
6,153,591	+		PFLU_RS27650	0.25	-3.2
6,153,591	+		PFLU_RS27650	0.25	-2.4
6,153,592	-		PFLU_RS27650	0.25	-3.0
6,153,592	-		PFLU_RS27650	0.25	-1.1
6,153,592	-		PFLU_RS27650	0.25	-3.8
6,153,592	-		PFLU_RS27650	0.25	-2.1
6,153,592	-		PFLU_RS27650	0.25	-3.0
6,153,592	-		PFLU_RS27650	0.25	-2.0
6,153,592	-		PFLU_RS27650	0.25	-1.1
6,153,592	-		PFLU_RS27650	0.25	-0.6
6,153,592	-		PFLU_RS27650	0.25	-2.5
6,153,592	-		PFLU_RS27650	0.25	-2.0
6,153,592	-		PFLU_RS27650	0.25	-1.5
6,153,592	-		PFLU_RS27650	0.25	-0.5
6,153,592	-		PFLU_RS27650	0.25	-2.1
6,153,592	-		PFLU_RS27650	0.25	-1.5
6,153,681	-		PFLU_RS27650	0.33	-1.4
6,153,832	+		PFLU_RS27650	0.48	-2.1
6,153,832	+		PFLU_RS27650	0.48	-3.2
6,153,832	+		PFLU_RS27650	0.48	-0.1
6,153,832	+		PFLU_RS27650	0.48	-3.3
6,153,833	-		PFLU_RS27650	0.48	-0.8
6,153,833	-		PFLU_RS27650	0.48	-1.8
6,153,833	-		PFLU_RS27650	0.48	+0.0
6,153,833	-		PFLU_RS27650	0.48	-3.4
6,153,833	-		PFLU_RS27650	0.48	-3.1
6,153,886	+		PFLU_RS27650	0.53	-1.7
6,153,887	-		PFLU_RS27650	0.53	+0.6
6,153,887	-		PFLU_RS27650	0.53	-0.3
6,153,903	-		PFLU_RS27650	0.54	-4.2
6,153,919	+		PFLU_RS27650	0.56	+0.5
6,153,919	+		PFLU_RS27650	0.56	-3.4
6,153,919	+		PFLU_RS27650	0.56	-0.8
6,153,919	+		PFLU_RS27650	0.56	-1.5
6,153,919	+		PFLU_RS27650	0.56	-2.6
6,153,919	+		PFLU_RS27650	0.56	-2.7
6,153,919	+		PFLU_RS27650	0.56	-1.5
6,153,919	+		PFLU_RS27650	0.56	-1.5
6,153,919	+		PFLU_RS27650	0.56	-1.7
6,153,919	+		PFLU_RS27650	0.56	-2.1
6,153,919	+		PFLU_RS27650	0.56	-2.7
6,153,919	+		PFLU_RS27650	0.56	-2.2
6,153,919	+		PFLU_RS27650	0.56	-0.5
6,153,919	+		PFLU_RS27650	0.56	-1.7
6,153,920	-		PFLU_RS27650	0.56	-0.9
6,153,920	-		PFLU_RS27650	0.56	-0.3
6,153,920	-		PFLU_RS27650	0.56	+0.2
6,153,920	-		PFLU_RS27650	0.56	-2.6
6,153,920	-		PFLU_RS27650	0.56	-1.3
6,153,920	-		PFLU_RS27650	0.56	-0.5
6,153,920	-		PFLU_RS27650	0.56	-0.8
6,153,920	-		PFLU_RS27650	0.56	+0.8
6,153,920	-		PFLU_RS27650	0.56	-1.0
6,153,920	-		PFLU_RS27650	0.56	-1.8
6,153,920	-		PFLU_RS27650	0.56	-2.4
6,153,920	-		PFLU_RS27650	0.56	-0.9
6,153,920	-		PFLU_RS27650	0.56	-1.3
6,153,920	-		PFLU_RS27650	0.56	-2.0
6,153,920	-		PFLU_RS27650	0.56	-3.0
6,153,922	+		PFLU_RS27650	0.56	-3.0
6,153,922	+		PFLU_RS27650	0.56	-0.4
6,153,923	-		PFLU_RS27650	0.56	+0.2
6,153,923	-		PFLU_RS27650	0.56	+0.2
6,153,923	-		PFLU_RS27650	0.56	-2.0
6,153,923	-		PFLU_RS27650	0.56	-2.8
6,154,008	+		PFLU_RS27650	0.64	-3.7
6,154,008	+		PFLU_RS27650	0.64	-2.1
6,154,009	-		PFLU_RS27650	0.64	+0.1
6,154,009	-		PFLU_RS27650	0.64	+0.5
6,154,033	+		PFLU_RS27650	0.67	-0.5
6,154,033	+		PFLU_RS27650	0.67	-3.5
6,154,033	+		PFLU_RS27650	0.67	-2.8
6,154,033	+		PFLU_RS27650	0.67	-3.0
6,154,033	+		PFLU_RS27650	0.67	-1.8
6,154,033	+		PFLU_RS27650	0.67	-2.7
6,154,033	+		PFLU_RS27650	0.67	-2.0
6,154,033	+		PFLU_RS27650	0.67	-2.6
6,154,033	+		PFLU_RS27650	0.67	-1.4
6,154,034	-		PFLU_RS27650	0.67	-0.8
6,154,034	-		PFLU_RS27650	0.67	-2.1
6,154,034	-		PFLU_RS27650	0.67	-2.2
6,154,034	-		PFLU_RS27650	0.67	-0.8
6,154,034	-		PFLU_RS27650	0.67	-1.0
6,154,034	-		PFLU_RS27650	0.67	-3.8
6,154,171	+		PFLU_RS27650	0.80	+1.2
6,154,171	+		PFLU_RS27650	0.80	-1.9
6,154,171	+		PFLU_RS27650	0.80	-0.4
6,154,171	+		PFLU_RS27650	0.80	-1.8
6,154,171	+		PFLU_RS27650	0.80	-1.4
6,154,171	+		PFLU_RS27650	0.80	+0.5
6,154,171	+		PFLU_RS27650	0.80	-0.5
6,154,172	-		PFLU_RS27650	0.80	-2.7
6,154,172	-		PFLU_RS27650	0.80	-3.5
6,154,172	-		PFLU_RS27650	0.80	-0.5
6,154,172	-		PFLU_RS27650	0.80	-1.1
6,154,192	+		PFLU_RS27650	0.82	-2.5
6,154,192	+		PFLU_RS27650	0.82	-2.1
6,154,192	+		PFLU_RS27650	0.82	-3.1
6,154,192	+		PFLU_RS27650	0.82	-1.3
6,154,192	+		PFLU_RS27650	0.82	-0.3
6,154,192	+		PFLU_RS27650	0.82	-3.4
6,154,192	+		PFLU_RS27650	0.82	-2.4
6,154,192	+		PFLU_RS27650	0.82	-2.9
6,154,192	+		PFLU_RS27650	0.82	-1.1
6,154,193	-		PFLU_RS27650	0.82	+1.0
6,154,193	-		PFLU_RS27650	0.82	-1.8
6,154,193	-		PFLU_RS27650	0.82	-1.1
6,154,193	-		PFLU_RS27650	0.82	-1.3
6,154,193	-		PFLU_RS27650	0.82	-3.1
6,154,401	+				-1.1
6,154,401	+				-0.2
6,154,402	-				-0.2
6,154,402	-				-1.8
6,154,402	-				-1.4
6,154,432	+				-2.0
6,154,433	-				-3.3
6,154,462	+				-1.5
6,154,462	+				-0.8
6,154,462	+				+0.9
6,154,462	+				-2.0
6,154,462	+				+1.2
6,154,462	+				-3.1
6,154,462	+				-0.9
6,154,463	-				-2.1
6,154,463	-				+1.4
6,154,463	-				-0.5
6,154,463	-				-1.8
6,154,463	-				-0.4
6,154,463	-				-1.8
6,154,463	-				-2.0
6,154,463	-				-0.4
6,154,463	-				+0.8
6,154,463	-				+1.0
6,154,466	+				-1.5
6,154,466	+				-2.9
6,154,466	+				-3.2
6,154,466	+				+1.0
6,154,466	+				-2.0
6,154,467	-				-0.7
6,154,467	-				+0.0
6,154,467	-				+0.0
6,154,467	-				+2.3
6,154,696	+		PFLU_RS27655	0.30	-1.0
6,154,721	+		PFLU_RS27655	0.33	+0.8
6,154,721	+		PFLU_RS27655	0.33	-0.9
6,154,722	-		PFLU_RS27655	0.33	+1.6
6,154,722	-		PFLU_RS27655	0.33	-0.3
6,154,722	-		PFLU_RS27655	0.33	-2.6
6,154,722	-		PFLU_RS27655	0.33	+0.7
6,154,722	-		PFLU_RS27655	0.33	-0.4
6,154,722	-		PFLU_RS27655	0.33	+0.5
6,154,803	+		PFLU_RS27655	0.44	-0.4
6,154,804	-		PFLU_RS27655	0.44	-0.3
6,154,863	+		PFLU_RS27655	0.52	+1.2
6,154,904	+		PFLU_RS27655	0.58	+0.5
6,154,904	+		PFLU_RS27655	0.58	+1.1
6,154,904	+		PFLU_RS27655	0.58	+0.4
6,154,904	+		PFLU_RS27655	0.58	-2.4
6,154,904	+		PFLU_RS27655	0.58	-2.9
6,154,904	+		PFLU_RS27655	0.58	+1.6
6,154,904	+		PFLU_RS27655	0.58	+1.0
6,154,905	-		PFLU_RS27655	0.58	+0.3
6,154,906	+		PFLU_RS27655	0.58	+1.9
6,154,906	+		PFLU_RS27655	0.58	-0.1
6,154,907	-		PFLU_RS27655	0.58	-0.0
6,154,907	-		PFLU_RS27655	0.58	-1.0
6,154,907	-		PFLU_RS27655	0.58	-2.4
6,154,958	+		PFLU_RS27655	0.65	+2.0
6,154,959	-		PFLU_RS27655	0.65	+1.8
6,154,959	-		PFLU_RS27655	0.65	-0.1
6,154,959	-		PFLU_RS27655	0.65	+2.0
6,154,959	-		PFLU_RS27655	0.65	+1.8
6,154,977	+		PFLU_RS27655	0.68	-0.3
6,154,977	+		PFLU_RS27655	0.68	-0.5
6,154,977	+		PFLU_RS27655	0.68	+0.6
6,154,977	+		PFLU_RS27655	0.68	+0.5
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