Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22045

Experiment: Growth at pH8 and (C) D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at pH8 and (C) D-Glucose
4,960,701	+				+0.8
4,960,701	+				-3.2
4,960,701	+				-0.3
4,960,756	+				+0.5
4,960,756	+				+0.0
4,960,756	+				-1.5
4,960,757	-				+1.0
4,960,757	-				-0.3
4,960,757	-				+0.5
4,960,757	-				+0.8
4,960,757	-				-1.9
4,960,757	-				+0.6
4,960,757	-				+1.5
4,960,781	-				-1.5
4,960,784	+				-0.1
4,960,784	+				-0.2
4,960,784	+				+0.5
4,960,784	+				+0.2
4,960,784	+				-0.9
4,960,785	-				-2.3
4,960,785	-				+1.6
4,960,785	-				-0.4
4,960,785	-				-2.1
4,960,785	-				-1.1
4,960,825	+				-3.4
4,960,848	+				+1.4
4,960,849	-				+0.2
4,960,849	-				-0.3
4,960,849	-				-1.9
4,960,849	-				+0.6
4,960,950	-				+0.1
4,960,950	-				-2.1
4,960,961	+				-1.1
4,961,002	+				+0.9
4,961,002	+				+0.7
4,961,002	+				-0.5
4,961,002	+				+1.9
4,961,003	-				-0.5
4,961,017	+		PFLU_RS22040	0.12	+0.9
4,961,017	+		PFLU_RS22040	0.12	+3.2
4,961,018	-		PFLU_RS22040	0.12	-1.1
4,961,049	-		PFLU_RS22040	0.18	+0.5
4,961,092	+		PFLU_RS22040	0.26	+1.0
4,961,092	+		PFLU_RS22040	0.26	-1.9
4,961,092	+		PFLU_RS22040	0.26	+1.2
4,961,092	+		PFLU_RS22040	0.26	-1.3
4,961,092	+		PFLU_RS22040	0.26	-0.9
4,961,092	+		PFLU_RS22040	0.26	+1.3
4,961,092	+		PFLU_RS22040	0.26	+1.2
4,961,093	-		PFLU_RS22040	0.26	-1.0
4,961,093	-		PFLU_RS22040	0.26	+0.5
4,961,093	-		PFLU_RS22040	0.26	+1.1
4,961,093	-		PFLU_RS22040	0.26	+0.8
4,961,093	-		PFLU_RS22040	0.26	+2.5
4,961,093	-		PFLU_RS22040	0.26	+1.6
4,961,093	-		PFLU_RS22040	0.26	-3.3
4,961,093	-		PFLU_RS22040	0.26	+0.6
4,961,093	-		PFLU_RS22040	0.26	-1.3
4,961,377	+		PFLU_RS22040	0.79	-1.1
4,961,377	+		PFLU_RS22040	0.79	+1.4
4,961,377	+		PFLU_RS22040	0.79	-0.5
4,961,377	+		PFLU_RS22040	0.79	-1.5
4,961,377	+		PFLU_RS22040	0.79	+1.6
4,961,378	-		PFLU_RS22040	0.79	+1.1
4,961,378	-		PFLU_RS22040	0.79	+1.7
4,961,378	-		PFLU_RS22040	0.79	-0.5
4,961,378	-		PFLU_RS22040	0.79	+1.7
4,961,393	+		PFLU_RS22040	0.81	+1.3
4,961,393	+		PFLU_RS22040	0.81	-0.1
4,961,393	+		PFLU_RS22040	0.81	+1.5
4,961,394	-		PFLU_RS22040	0.82	-0.5
4,961,394	-		PFLU_RS22040	0.82	+1.2
4,961,394	-		PFLU_RS22040	0.82	+0.9
4,961,465	+				+1.5
4,961,465	+				+1.4
4,961,466	-				+1.6
4,961,466	-				+0.7
4,961,606	+				-1.5
4,961,607	-				-0.1
4,961,657	+				+0.5
4,961,710	+		PFLU_RS22045	0.12	+0.3
4,961,710	+		PFLU_RS22045	0.12	-3.0
4,961,710	+		PFLU_RS22045	0.12	-2.4
4,961,711	-		PFLU_RS22045	0.12	-0.2
4,961,711	-		PFLU_RS22045	0.12	-2.1
4,961,711	-		PFLU_RS22045	0.12	-1.6
4,961,711	-		PFLU_RS22045	0.12	-0.5
4,961,711	-		PFLU_RS22045	0.12	-1.3
4,961,711	-		PFLU_RS22045	0.12	+0.2
4,961,711	-		PFLU_RS22045	0.12	+0.4
4,961,711	-		PFLU_RS22045	0.12	-0.7
4,961,768	+		PFLU_RS22045	0.21	-2.5
4,961,788	+		PFLU_RS22045	0.24	+0.6
4,961,788	+		PFLU_RS22045	0.24	-0.9
4,961,788	+		PFLU_RS22045	0.24	+0.5
4,961,788	+		PFLU_RS22045	0.24	+0.4
4,961,788	+		PFLU_RS22045	0.24	+0.5
4,961,788	+		PFLU_RS22045	0.24	-1.7
4,961,788	+		PFLU_RS22045	0.24	-2.3
4,961,789	-		PFLU_RS22045	0.24	-0.5
4,961,789	-		PFLU_RS22045	0.24	-0.5
4,961,789	-		PFLU_RS22045	0.24	-2.0
4,961,789	-		PFLU_RS22045	0.24	-2.1
4,961,789	-		PFLU_RS22045	0.24	-3.3
4,961,789	-		PFLU_RS22045	0.24	-1.5
4,961,789	-		PFLU_RS22045	0.24	-2.2
4,961,789	-		PFLU_RS22045	0.24	-3.3
4,961,789	-		PFLU_RS22045	0.24	-0.8
4,961,789	-		PFLU_RS22045	0.24	-1.1
4,961,789	-		PFLU_RS22045	0.24	+0.1
4,961,789	-		PFLU_RS22045	0.24	-3.4
4,961,792	+		PFLU_RS22045	0.25	-0.3
4,961,825	+		PFLU_RS22045	0.30	-0.2
4,961,825	+		PFLU_RS22045	0.30	-0.1
4,961,826	-		PFLU_RS22045	0.30	-2.9
4,961,826	-		PFLU_RS22045	0.30	-1.1
4,961,903	+		PFLU_RS22045	0.42	-0.0
4,961,904	-		PFLU_RS22045	0.42	-2.0
4,961,944	+		PFLU_RS22045	0.49	+0.5
4,961,944	+		PFLU_RS22045	0.49	+0.1
4,961,944	+		PFLU_RS22045	0.49	+0.4
4,961,984	+		PFLU_RS22045	0.55	-1.1
4,961,984	+		PFLU_RS22045	0.55	+0.5
4,961,984	+		PFLU_RS22045	0.55	-0.6
4,961,984	+		PFLU_RS22045	0.55	+2.1
4,961,985	-		PFLU_RS22045	0.55	-1.3
4,961,985	-		PFLU_RS22045	0.55	+0.1
4,962,061	+		PFLU_RS22045	0.67	-1.5
4,962,061	+		PFLU_RS22045	0.67	-1.1
4,962,062	-		PFLU_RS22045	0.67	-0.5
4,962,062	-		PFLU_RS22045	0.67	-2.2
4,962,119	-		PFLU_RS22045	0.77	-1.1
4,962,119	-		PFLU_RS22045	0.77	-1.6
4,962,225	-				+0.2
4,962,261	+				-1.4
4,962,261	+				+0.5
4,962,261	+				+0.8
4,962,261	+				+0.8
4,962,262	-				-0.6
4,962,262	-				-0.1
4,962,286	-				+1.5
4,962,289	+				-0.5
4,962,289	+				-1.1
4,962,289	+				+1.1
4,962,289	+				+0.3
4,962,289	+				-0.1
4,962,289	+				+1.0
4,962,289	+				-0.3
4,962,289	+				-2.0
4,962,289	+				+1.1
4,962,289	+				+0.2
4,962,289	+				-0.5
4,962,289	+				+0.4
4,962,289	+				-1.5
4,962,289	+				-3.1
4,962,290	-				-0.9
4,962,290	-				-0.9
4,962,290	-				+1.9
4,962,290	-				-2.7
4,962,290	-				-0.3
4,962,290	-				+0.9
4,962,290	-				-1.9
4,962,290	-				-0.1
4,962,290	-				+2.5
4,962,290	-				-0.1
4,962,290	-				-1.3
4,962,290	-				+1.2
4,962,290	-				-0.3
4,962,290	-				-0.9
4,962,314	-				-2.1
4,962,345	+				-3.6
4,962,345	+				+0.9
4,962,345	+				-0.0
4,962,345	+				+1.7
4,962,346	-				-1.7
4,962,346	-				+1.5
4,962,346	-				-0.6
4,962,366	+				+1.3
4,962,366	+				+0.7
4,962,367	-				-1.1
4,962,367	-				+0.1
4,962,367	-				+2.0
4,962,375	+				+2.4
4,962,376	-				+0.5
4,962,376	-				+1.9
4,962,376	-				+1.1
4,962,382	+				+0.3
4,962,382	+				-2.6
4,962,392	+				+0.3
4,962,393	-				+1.9
4,962,393	-				-0.6
4,962,477	+				-0.5
4,963,240	-				-2.1
4,963,240	-				+1.1
4,963,240	-				-2.3