Experiment: Growth at pH8 and (C) D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS18385 and PFLU_RS18390 overlap by 1 nucleotides PFLU_RS18390 and PFLU_RS18395 overlap by 4 nucleotides PFLU_RS18395 and PFLU_RS18400 are separated by 83 nucleotides
PFLU_RS18385: PFLU_RS18385 - tetraacyldisaccharide 4'-kinase, at 4,167,057 to 4,168,067
_RS18385
PFLU_RS18390: PFLU_RS18390 - biopolymer transporter ExbD, at 4,168,067 to 4,168,495
_RS18390
PFLU_RS18395: PFLU_RS18395 - MotA/TolQ/ExbB proton channel family protein, at 4,168,492 to 4,169,127
_RS18395
PFLU_RS18400: PFLU_RS18400 - DNA internalization-related competence protein ComEC/Rec2, at 4,169,211 to 4,171,436
_RS18400
Position (kb) 4168
4169
4170 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4168.675 kb on - strand, within PFLU_RS18395 at 4168.675 kb on - strand, within PFLU_RS18395 at 4168.675 kb on - strand, within PFLU_RS18395 at 4168.812 kb on - strand, within PFLU_RS18395 at 4168.812 kb on - strand, within PFLU_RS18395 at 4168.812 kb on - strand, within PFLU_RS18395 at 4169.160 kb on + strand at 4169.160 kb on + strand at 4169.161 kb on - strand at 4169.161 kb on - strand at 4169.165 kb on + strand at 4169.165 kb on + strand at 4169.165 kb on + strand at 4169.165 kb on + strand at 4169.166 kb on - strand at 4169.166 kb on - strand at 4169.166 kb on - strand at 4169.166 kb on - strand at 4169.166 kb on - strand at 4169.166 kb on - strand at 4169.166 kb on - strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.167 kb on + strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.168 kb on - strand at 4169.212 kb on + strand at 4169.212 kb on + strand at 4169.212 kb on + strand at 4169.212 kb on + strand at 4169.213 kb on - strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.314 kb on + strand at 4169.315 kb on - strand at 4169.315 kb on - strand at 4169.315 kb on - strand at 4169.315 kb on - strand at 4169.315 kb on - strand at 4169.315 kb on - strand at 4169.315 kb on - strand at 4169.315 kb on - strand at 4169.315 kb on - strand at 4169.315 kb on - strand at 4169.338 kb on + strand at 4169.397 kb on - strand at 4169.397 kb on - strand at 4169.890 kb on + strand, within PFLU_RS18400 at 4169.890 kb on + strand, within PFLU_RS18400 at 4169.890 kb on + strand, within PFLU_RS18400 at 4169.890 kb on + strand, within PFLU_RS18400 at 4169.890 kb on + strand, within PFLU_RS18400 at 4169.890 kb on + strand, within PFLU_RS18400 at 4169.890 kb on + strand, within PFLU_RS18400 at 4169.890 kb on + strand, within PFLU_RS18400 at 4169.891 kb on - strand, within PFLU_RS18400 at 4169.891 kb on - strand, within PFLU_RS18400
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at pH8 and (C) D-Glucose remove 4,168,675 - PFLU_RS18395 0.29 -0.9 4,168,675 - PFLU_RS18395 0.29 +1.1 4,168,675 - PFLU_RS18395 0.29 -0.4 4,168,812 - PFLU_RS18395 0.50 -1.7 4,168,812 - PFLU_RS18395 0.50 -0.9 4,168,812 - PFLU_RS18395 0.50 +0.1 4,169,160 + +0.1 4,169,160 + -3.4 4,169,161 - +1.6 4,169,161 - +0.6 4,169,165 + +1.6 4,169,165 + -1.0 4,169,165 + +0.1 4,169,165 + -1.2 4,169,166 - -3.2 4,169,166 - -2.8 4,169,166 - +1.7 4,169,166 - -0.7 4,169,166 - +0.3 4,169,166 - -1.2 4,169,166 - +0.4 4,169,167 + +1.4 4,169,167 + -2.6 4,169,167 + -2.3 4,169,167 + +0.6 4,169,167 + +0.8 4,169,167 + +0.1 4,169,167 + -0.5 4,169,167 + -1.1 4,169,167 + -1.2 4,169,167 + +1.3 4,169,167 + +1.2 4,169,167 + -1.4 4,169,167 + -1.4 4,169,167 + -0.2 4,169,167 + -1.2 4,169,167 + +0.6 4,169,167 + +0.6 4,169,167 + +2.1 4,169,167 + +0.3 4,169,167 + -0.9 4,169,167 + -0.2 4,169,167 + -2.2 4,169,167 + -0.9 4,169,167 + -2.9 4,169,167 + +0.1 4,169,167 + +0.4 4,169,167 + -2.8 4,169,167 + -0.7 4,169,167 + -1.4 4,169,167 + +0.8 4,169,167 + -0.2 4,169,167 + -1.1 4,169,167 + +0.1 4,169,168 - +1.5 4,169,168 - +2.4 4,169,168 - +0.3 4,169,168 - -2.8 4,169,168 - -0.8 4,169,168 - -1.6 4,169,168 - +0.3 4,169,168 - -2.0 4,169,168 - +0.4 4,169,168 - +2.3 4,169,168 - +0.6 4,169,168 - +0.6 4,169,168 - -2.2 4,169,168 - -0.5 4,169,168 - +0.9 4,169,168 - -1.3 4,169,168 - +0.1 4,169,168 - -2.4 4,169,168 - -0.4 4,169,168 - -2.0 4,169,168 - -2.4 4,169,168 - +1.7 4,169,168 - -1.9 4,169,168 - +0.4 4,169,168 - -2.3 4,169,168 - -0.4 4,169,168 - -3.2 4,169,168 - +0.4 4,169,168 - +3.0 4,169,168 - +2.7 4,169,168 - -0.2 4,169,168 - +0.4 4,169,168 - -1.0 4,169,168 - -0.7 4,169,168 - +0.6 4,169,168 - +0.1 4,169,168 - +1.2 4,169,168 - +1.0 4,169,168 - -0.2 4,169,168 - -1.4 4,169,168 - +2.5 4,169,168 - +1.1 4,169,212 + +0.1 4,169,212 + +1.1 4,169,212 + -0.7 4,169,212 + -0.4 4,169,213 - +0.3 4,169,314 + -2.0 4,169,314 + -0.0 4,169,314 + -0.7 4,169,314 + -2.2 4,169,314 + +1.0 4,169,314 + +0.5 4,169,314 + -0.9 4,169,314 + +1.1 4,169,314 + +0.1 4,169,314 + -0.2 4,169,314 + -0.0 4,169,314 + -0.1 4,169,314 + -0.2 4,169,314 + +0.1 4,169,315 - +0.7 4,169,315 - +0.0 4,169,315 - -0.9 4,169,315 - -0.9 4,169,315 - -1.3 4,169,315 - -3.2 4,169,315 - +1.8 4,169,315 - -1.1 4,169,315 - -0.1 4,169,315 - -2.6 4,169,338 + +0.6 4,169,397 - -2.6 4,169,397 - -1.3 4,169,890 + PFLU_RS18400 0.31 -1.7 4,169,890 + PFLU_RS18400 0.31 +1.2 4,169,890 + PFLU_RS18400 0.31 +1.2 4,169,890 + PFLU_RS18400 0.31 +0.2 4,169,890 + PFLU_RS18400 0.31 +0.9 4,169,890 + PFLU_RS18400 0.31 -2.3 4,169,890 + PFLU_RS18400 0.31 +1.5 4,169,890 + PFLU_RS18400 0.31 -0.7 4,169,891 - PFLU_RS18400 0.31 -1.5 4,169,891 - PFLU_RS18400 0.31 -0.2
Or see this region's nucleotide sequence