Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13795

Experiment: Growth at pH8 and (C) D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at pH8 and (C) D-Glucose
3,113,075	+		PFLU_RS30290	0.85	-2.3
3,113,135	+				-1.2
3,113,153	+				-1.5
3,113,157	+				+1.4
3,113,157	+				+1.3
3,113,157	+				+2.0
3,113,157	+				-0.2
3,113,157	+				+1.8
3,113,157	+				-2.2
3,113,157	+				+2.2
3,113,157	+				-3.2
3,113,158	-				-0.7
3,113,178	+				+1.0
3,113,192	+				-2.3
3,113,192	+				-3.2
3,113,192	+				+0.7
3,113,192	+				+1.3
3,113,192	+				+2.1
3,113,192	+				+1.8
3,113,193	-				+2.3
3,113,193	-				+0.8
3,113,193	-				-1.5
3,113,193	-				-1.5
3,113,193	-				+0.7
3,113,196	+				+2.1
3,113,197	-				+1.0
3,113,204	+				+0.4
3,113,204	+				-2.5
3,113,204	+				-2.6
3,113,205	-				-1.7
3,113,205	-				+0.8
3,113,360	+				+1.3
3,113,360	+				+0.2
3,113,360	+				-2.3
3,113,361	-				+0.0
3,113,364	+				+2.3
3,113,364	+				-0.2
3,113,364	+				-1.9
3,113,364	+				+0.5
3,113,364	+				-1.2
3,113,364	+				-0.7
3,113,364	+				-0.2
3,113,364	+				+0.2
3,113,365	-				-1.7
3,113,365	-				+1.4
3,113,365	-				-0.2
3,113,365	-				+2.2
3,113,365	-				+1.1
3,113,365	-				+0.8
3,113,365	-				-0.2
3,113,365	-				+0.8
3,113,365	-				-0.0
3,113,365	-				-1.1
3,113,365	-				-1.0
3,113,365	-				+0.5
3,113,365	-				+0.4
3,113,365	-				-1.1
3,113,365	-				-0.1
3,113,437	+		PFLU_RS13790	0.10	+0.0
3,113,437	+		PFLU_RS13790	0.10	+3.2
3,113,437	+		PFLU_RS13790	0.10	-2.0
3,113,437	+		PFLU_RS13790	0.10	-2.2
3,113,437	+		PFLU_RS13790	0.10	-1.2
3,113,437	+		PFLU_RS13790	0.10	-1.5
3,113,437	+		PFLU_RS13790	0.10	-1.3
3,113,437	+		PFLU_RS13790	0.10	+2.2
3,113,437	+		PFLU_RS13790	0.10	-0.3
3,113,437	+		PFLU_RS13790	0.10	-0.5
3,113,437	+		PFLU_RS13790	0.10	+0.8
3,113,437	+		PFLU_RS13790	0.10	-1.7
3,113,438	-		PFLU_RS13790	0.11	-0.3
3,113,438	-		PFLU_RS13790	0.11	+1.3
3,113,438	-		PFLU_RS13790	0.11	-2.2
3,113,438	-		PFLU_RS13790	0.11	+0.8
3,113,438	-		PFLU_RS13790	0.11	+1.1
3,113,468	+		PFLU_RS13790	0.15	-2.0
3,113,469	-		PFLU_RS13790	0.15	+1.8
3,113,514	+		PFLU_RS13790	0.22	+0.7
3,113,515	-		PFLU_RS13790	0.23	-2.2
3,113,553	-		PFLU_RS13790	0.29	-0.3
3,113,740	+		PFLU_RS13790	0.58	+0.8
3,113,740	+		PFLU_RS13790	0.58	+1.2
3,113,740	+		PFLU_RS13790	0.58	+0.7
3,113,740	+		PFLU_RS13790	0.58	-0.6
3,113,740	+		PFLU_RS13790	0.58	-2.3
3,113,740	+		PFLU_RS13790	0.58	+1.3
3,113,740	+		PFLU_RS13790	0.58	+1.5
3,113,740	+		PFLU_RS13790	0.58	+2.3
3,113,740	+		PFLU_RS13790	0.58	-1.5
3,113,740	+		PFLU_RS13790	0.58	-1.7
3,113,741	-		PFLU_RS13790	0.58	-0.2
3,113,741	-		PFLU_RS13790	0.58	-2.5
3,113,741	-		PFLU_RS13790	0.58	-2.0
3,113,741	-		PFLU_RS13790	0.58	-1.2
3,113,741	-		PFLU_RS13790	0.58	+0.8
3,113,741	-		PFLU_RS13790	0.58	+1.0
3,113,741	-		PFLU_RS13790	0.58	+0.1
3,113,741	-		PFLU_RS13790	0.58	+0.3
3,113,741	-		PFLU_RS13790	0.58	-1.5
3,113,741	-		PFLU_RS13790	0.58	-1.5
3,113,741	-		PFLU_RS13790	0.58	-1.0
3,113,741	-		PFLU_RS13790	0.58	+0.7
3,113,800	+		PFLU_RS13790	0.67	-0.7
3,113,800	+		PFLU_RS13790	0.67	+1.8
3,113,800	+		PFLU_RS13790	0.67	-0.7
3,113,801	-		PFLU_RS13790	0.67	-1.7
3,113,813	+		PFLU_RS13790	0.69	-0.1
3,113,813	+		PFLU_RS13790	0.69	-0.7
3,113,813	+		PFLU_RS13790	0.69	+0.8
3,113,813	+		PFLU_RS13790	0.69	-0.3
3,113,813	+		PFLU_RS13790	0.69	+1.6
3,113,813	+		PFLU_RS13790	0.69	-0.7
3,113,814	-		PFLU_RS13790	0.69	+0.1
3,113,814	-		PFLU_RS13790	0.69	+1.8
3,113,814	-		PFLU_RS13790	0.69	+2.4
3,113,814	-		PFLU_RS13790	0.69	-3.1
3,113,814	-		PFLU_RS13790	0.69	-0.2
3,113,858	-		PFLU_RS13790	0.76	-0.9
3,113,858	-		PFLU_RS13790	0.76	-0.3
3,114,005	+				-2.6
3,114,006	-				+1.8
3,114,046	-				+1.8
3,114,056	+				+1.6
3,114,059	-				+1.0
3,114,059	-				-0.7
3,114,080	+				+2.3
3,114,179	+		PFLU_RS13795	0.27	-1.5
3,114,366	-		PFLU_RS13795	0.70	-0.7
3,114,396	-		PFLU_RS13795	0.77	-1.3
3,114,414	-		PFLU_RS13795	0.81	-0.2
3,114,414	-		PFLU_RS13795	0.81	+0.1
3,114,513	+				-0.8
3,114,551	+				-0.2
3,114,620	-				+1.5
3,114,743	+				-1.5
3,114,743	+				+1.3
3,114,743	+				-0.2
3,114,743	+				+2.1
3,114,743	+				+1.1
3,114,744	-				+0.3
3,114,744	-				-1.2
3,114,744	-				+2.4
3,114,744	-				+2.1
3,114,744	-				+1.1
3,114,744	-				-2.6
3,114,744	-				+0.8
3,114,805	-		PFLU_RS13800	0.13	-1.5
3,114,818	+		PFLU_RS13800	0.13	+1.4
3,114,818	+		PFLU_RS13800	0.13	+0.5
3,114,818	+		PFLU_RS13800	0.13	-0.5
3,114,818	+		PFLU_RS13800	0.13	+1.0
3,114,819	-		PFLU_RS13800	0.13	-0.5
3,114,819	-		PFLU_RS13800	0.13	+0.8
3,114,819	-		PFLU_RS13800	0.13	+0.3
3,114,819	-		PFLU_RS13800	0.13	+3.2
3,114,981	+		PFLU_RS13800	0.22	-0.2
3,114,981	+		PFLU_RS13800	0.22	-2.0
3,114,982	-		PFLU_RS13800	0.22	-1.5
3,114,982	-		PFLU_RS13800	0.22	+2.3
3,115,014	+		PFLU_RS13800	0.23	-2.7
3,115,014	+		PFLU_RS13800	0.23	+1.8
3,115,025	+		PFLU_RS13800	0.24	-0.5
3,115,025	+		PFLU_RS13800	0.24	-0.5
3,115,025	+		PFLU_RS13800	0.24	-0.7
3,115,025	+		PFLU_RS13800	0.24	+0.8
3,115,025	+		PFLU_RS13800	0.24	+1.3
3,115,025	+		PFLU_RS13800	0.24	-1.5
3,115,025	+		PFLU_RS13800	0.24	+1.0
3,115,026	-		PFLU_RS13800	0.24	+0.3
3,115,026	-		PFLU_RS13800	0.24	+1.6
3,115,028	+		PFLU_RS13800	0.24	+3.2
3,115,028	+		PFLU_RS13800	0.24	-2.3
3,115,028	+		PFLU_RS13800	0.24	-2.3
3,115,029	-		PFLU_RS13800	0.24	-1.6
3,115,029	-		PFLU_RS13800	0.24	+0.9
3,115,041	-		PFLU_RS13800	0.25	+0.3
3,115,041	-		PFLU_RS13800	0.25	-0.1
3,115,121	+		PFLU_RS13800	0.29	-2.0
3,115,121	+		PFLU_RS13800	0.29	-0.0
3,115,122	-		PFLU_RS13800	0.29	+1.8
3,115,122	-		PFLU_RS13800	0.29	-0.4
3,115,341	+		PFLU_RS13800	0.41	-0.2
3,115,341	+		PFLU_RS13800	0.41	-0.7
3,115,462	+		PFLU_RS13800	0.47	-0.7
3,115,462	+		PFLU_RS13800	0.47	+2.4
3,115,463	-		PFLU_RS13800	0.47	+0.1