Experiment: H2 deepwell acetate FREE
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS03150 and MMP_RS03155 are separated by 4 nucleotides MMP_RS03155 and MMP_RS03160 are separated by 34 nucleotides MMP_RS03160 and MMP_RS09045 are separated by 94 nucleotides
MMP_RS03150: MMP_RS03150 - phosphoglycerate mutase, at 594,165 to 595,451
_RS03150
MMP_RS03155: MMP_RS03155 - precorrin-6A reductase, at 595,456 to 596,202
_RS03155
MMP_RS03160: MMP_RS03160 - class III signal peptide-containing protein, at 596,237 to 596,920
_RS03160
MMP_RS09045: MMP_RS09045 - class III signal peptide-containing protein, at 597,015 to 597,902
_RS09045
Position (kb) 595
596
597 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 594.466 kb on - strand, within MMP_RS03150 at 594.477 kb on - strand, within MMP_RS03150 at 594.478 kb on + strand, within MMP_RS03150 at 594.494 kb on + strand, within MMP_RS03150 at 594.494 kb on + strand, within MMP_RS03150 at 594.498 kb on + strand, within MMP_RS03150 at 594.498 kb on + strand, within MMP_RS03150 at 594.687 kb on + strand, within MMP_RS03150 at 594.890 kb on - strand, within MMP_RS03150 at 595.243 kb on - strand, within MMP_RS03150 at 595.277 kb on - strand, within MMP_RS03150 at 595.308 kb on + strand, within MMP_RS03150 at 595.324 kb on - strand at 595.325 kb on + strand at 595.340 kb on + strand at 595.375 kb on - strand at 595.378 kb on - strand at 595.379 kb on + strand at 595.381 kb on + strand at 595.435 kb on - strand at 595.435 kb on - strand at 595.435 kb on - strand at 595.436 kb on + strand at 595.444 kb on - strand at 595.445 kb on + strand at 595.517 kb on + strand at 595.533 kb on - strand, within MMP_RS03155 at 595.612 kb on + strand, within MMP_RS03155 at 595.618 kb on - strand, within MMP_RS03155 at 595.619 kb on + strand, within MMP_RS03155 at 595.642 kb on - strand, within MMP_RS03155 at 595.643 kb on + strand, within MMP_RS03155 at 595.643 kb on + strand, within MMP_RS03155 at 595.807 kb on + strand, within MMP_RS03155 at 595.808 kb on - strand, within MMP_RS03155 at 595.808 kb on - strand, within MMP_RS03155 at 595.809 kb on + strand, within MMP_RS03155 at 595.814 kb on + strand, within MMP_RS03155 at 595.840 kb on - strand, within MMP_RS03155 at 595.916 kb on - strand, within MMP_RS03155 at 596.146 kb on + strand at 596.161 kb on + strand at 596.226 kb on + strand at 596.229 kb on - strand at 596.230 kb on + strand at 596.271 kb on + strand at 596.271 kb on + strand at 596.273 kb on + strand at 596.334 kb on + strand, within MMP_RS03160 at 596.360 kb on - strand, within MMP_RS03160 at 596.528 kb on + strand, within MMP_RS03160 at 596.579 kb on + strand, within MMP_RS03160 at 596.614 kb on - strand, within MMP_RS03160 at 596.614 kb on - strand, within MMP_RS03160 at 596.635 kb on + strand, within MMP_RS03160 at 596.635 kb on + strand, within MMP_RS03160 at 596.639 kb on - strand, within MMP_RS03160 at 596.643 kb on - strand, within MMP_RS03160 at 596.643 kb on - strand, within MMP_RS03160 at 596.643 kb on - strand, within MMP_RS03160 at 596.643 kb on - strand, within MMP_RS03160 at 596.643 kb on - strand, within MMP_RS03160 at 596.643 kb on - strand, within MMP_RS03160 at 596.643 kb on - strand, within MMP_RS03160 at 596.644 kb on + strand, within MMP_RS03160 at 596.644 kb on + strand, within MMP_RS03160 at 596.644 kb on + strand, within MMP_RS03160 at 596.644 kb on + strand, within MMP_RS03160 at 596.644 kb on + strand, within MMP_RS03160 at 596.648 kb on + strand, within MMP_RS03160 at 596.666 kb on - strand, within MMP_RS03160 at 596.667 kb on + strand, within MMP_RS03160 at 596.667 kb on + strand, within MMP_RS03160 at 596.686 kb on + strand, within MMP_RS03160 at 596.741 kb on - strand, within MMP_RS03160 at 596.742 kb on + strand, within MMP_RS03160 at 596.801 kb on - strand, within MMP_RS03160 at 596.801 kb on - strand, within MMP_RS03160 at 596.802 kb on + strand, within MMP_RS03160 at 596.861 kb on - strand at 596.861 kb on - strand at 596.882 kb on - strand at 596.882 kb on - strand at 596.920 kb on - strand at 596.920 kb on - strand at 596.920 kb on - strand at 596.922 kb on - strand at 596.923 kb on + strand at 596.923 kb on + strand at 596.923 kb on + strand at 596.924 kb on - strand at 596.924 kb on - strand at 596.924 kb on - strand at 596.925 kb on + strand at 596.952 kb on + strand at 596.952 kb on + strand at 596.956 kb on - strand at 596.956 kb on - strand at 596.956 kb on - strand at 596.956 kb on - strand at 596.956 kb on - strand at 596.957 kb on + strand at 596.957 kb on + strand at 596.959 kb on + strand at 596.961 kb on + strand at 596.989 kb on - strand at 596.990 kb on + strand at 597.038 kb on - strand at 597.042 kb on + strand at 597.043 kb on - strand at 597.043 kb on - strand at 597.080 kb on - strand at 597.080 kb on - strand at 597.108 kb on - strand, within MMP_RS09045 at 597.115 kb on - strand, within MMP_RS09045 at 597.147 kb on + strand, within MMP_RS09045 at 597.197 kb on + strand, within MMP_RS09045 at 597.197 kb on + strand, within MMP_RS09045
Per-strain Table
Position Strand Gene LocusTag Fraction H2 deepwell acetate FREE remove 594,466 - MMP_RS03150 0.23 +0.4 594,477 - MMP_RS03150 0.24 +0.5 594,478 + MMP_RS03150 0.24 +1.4 594,494 + MMP_RS03150 0.26 +1.6 594,494 + MMP_RS03150 0.26 -1.6 594,498 + MMP_RS03150 0.26 -0.0 594,498 + MMP_RS03150 0.26 +0.1 594,687 + MMP_RS03150 0.41 +0.0 594,890 - MMP_RS03150 0.56 +0.5 595,243 - MMP_RS03150 0.84 +1.0 595,277 - MMP_RS03150 0.86 +1.5 595,308 + MMP_RS03150 0.89 -0.1 595,324 - -0.7 595,325 + +0.2 595,340 + +0.8 595,375 - -0.3 595,378 - +0.3 595,379 + +0.7 595,381 + +0.8 595,435 - -1.3 595,435 - +0.2 595,435 - +1.2 595,436 + +0.7 595,444 - +0.2 595,445 + +1.0 595,517 + -2.7 595,533 - MMP_RS03155 0.10 -3.6 595,612 + MMP_RS03155 0.21 -3.9 595,618 - MMP_RS03155 0.22 -3.1 595,619 + MMP_RS03155 0.22 -1.9 595,642 - MMP_RS03155 0.25 -3.0 595,643 + MMP_RS03155 0.25 -3.8 595,643 + MMP_RS03155 0.25 -2.3 595,807 + MMP_RS03155 0.47 -2.4 595,808 - MMP_RS03155 0.47 -2.8 595,808 - MMP_RS03155 0.47 -3.4 595,809 + MMP_RS03155 0.47 -3.7 595,814 + MMP_RS03155 0.48 -2.9 595,840 - MMP_RS03155 0.51 -3.9 595,916 - MMP_RS03155 0.62 -5.1 596,146 + -2.4 596,161 + -2.6 596,226 + +0.1 596,229 - -1.0 596,230 + -1.6 596,271 + -0.5 596,271 + +1.1 596,273 + -1.6 596,334 + MMP_RS03160 0.14 +0.1 596,360 - MMP_RS03160 0.18 +0.2 596,528 + MMP_RS03160 0.43 +0.1 596,579 + MMP_RS03160 0.50 -2.7 596,614 - MMP_RS03160 0.55 +1.0 596,614 - MMP_RS03160 0.55 +1.2 596,635 + MMP_RS03160 0.58 +0.5 596,635 + MMP_RS03160 0.58 +0.1 596,639 - MMP_RS03160 0.59 +0.3 596,643 - MMP_RS03160 0.59 -0.5 596,643 - MMP_RS03160 0.59 -0.2 596,643 - MMP_RS03160 0.59 -0.1 596,643 - MMP_RS03160 0.59 -1.5 596,643 - MMP_RS03160 0.59 +0.7 596,643 - MMP_RS03160 0.59 -0.1 596,643 - MMP_RS03160 0.59 -0.1 596,644 + MMP_RS03160 0.60 -1.4 596,644 + MMP_RS03160 0.60 +0.3 596,644 + MMP_RS03160 0.60 -2.6 596,644 + MMP_RS03160 0.60 -0.4 596,644 + MMP_RS03160 0.60 -1.2 596,648 + MMP_RS03160 0.60 -0.2 596,666 - MMP_RS03160 0.63 +1.0 596,667 + MMP_RS03160 0.63 +0.7 596,667 + MMP_RS03160 0.63 -0.9 596,686 + MMP_RS03160 0.66 -1.5 596,741 - MMP_RS03160 0.74 +1.5 596,742 + MMP_RS03160 0.74 -0.1 596,801 - MMP_RS03160 0.82 -0.8 596,801 - MMP_RS03160 0.82 -1.8 596,802 + MMP_RS03160 0.83 +0.3 596,861 - -0.9 596,861 - +1.1 596,882 - +0.6 596,882 - -2.8 596,920 - +0.5 596,920 - +1.2 596,920 - +1.3 596,922 - +1.5 596,923 + +2.9 596,923 + -0.7 596,923 + +0.7 596,924 - +0.1 596,924 - -0.5 596,924 - +0.0 596,925 + +0.2 596,952 + +0.5 596,952 + -0.6 596,956 - +0.1 596,956 - -0.8 596,956 - +1.2 596,956 - -0.2 596,956 - -1.9 596,957 + +0.9 596,957 + +0.1 596,959 + +0.1 596,961 + -0.5 596,989 - -0.3 596,990 + +1.2 597,038 - -0.9 597,042 + +0.6 597,043 - -0.1 597,043 - +0.5 597,080 - -0.3 597,080 - -0.9 597,108 - MMP_RS09045 0.10 +0.9 597,115 - MMP_RS09045 0.11 -0.8 597,147 + MMP_RS09045 0.15 -0.5 597,197 + MMP_RS09045 0.20 -0.9 597,197 + MMP_RS09045 0.20 -0.2
Or see this region's nucleotide sequence