Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07785

Experiment: R2A with Chloride 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloride 250 mM
1,691,286	+		LRK54_RS07780	0.37	+1.7
1,691,286	+		LRK54_RS07780	0.37	-0.5
1,691,286	+		LRK54_RS07780	0.37	+0.3
1,691,286	+		LRK54_RS07780	0.37	-0.7
1,691,286	+		LRK54_RS07780	0.37	-0.0
1,691,286	+		LRK54_RS07780	0.37	+1.1
1,691,287	-		LRK54_RS07780	0.37	+0.3
1,691,287	-		LRK54_RS07780	0.37	+0.9
1,691,287	-		LRK54_RS07780	0.37	+1.0
1,691,287	-		LRK54_RS07780	0.37	-0.5
1,691,287	-		LRK54_RS07780	0.37	+1.3
1,691,301	+		LRK54_RS07780	0.38	-0.1
1,691,766	+		LRK54_RS07780	0.70	+0.1
1,691,766	+		LRK54_RS07780	0.70	-2.1
1,691,766	+		LRK54_RS07780	0.70	-0.5
1,691,766	+		LRK54_RS07780	0.70	+0.1
1,691,766	+		LRK54_RS07780	0.70	+0.1
1,691,766	+		LRK54_RS07780	0.70	-0.3
1,691,766	+		LRK54_RS07780	0.70	+0.6
1,691,766	+		LRK54_RS07780	0.70	-0.9
1,691,766	+		LRK54_RS07780	0.70	-0.3
1,691,766	+		LRK54_RS07780	0.70	-0.0
1,691,767	-		LRK54_RS07780	0.70	-1.3
1,691,767	-		LRK54_RS07780	0.70	+0.3
1,691,767	-		LRK54_RS07780	0.70	+0.4
1,691,767	-		LRK54_RS07780	0.70	-0.4
1,691,767	-		LRK54_RS07780	0.70	+1.0
1,691,767	-		LRK54_RS07780	0.70	+0.2
1,691,767	-		LRK54_RS07780	0.70	+0.0
1,691,847	+		LRK54_RS07780	0.76	-0.3
1,691,847	+		LRK54_RS07780	0.76	+2.7
1,691,847	+		LRK54_RS07780	0.76	-0.5
1,691,847	+		LRK54_RS07780	0.76	-1.2
1,691,847	+		LRK54_RS07780	0.76	+0.3
1,691,847	+		LRK54_RS07780	0.76	-2.0
1,691,847	+		LRK54_RS07780	0.76	-1.6
1,691,847	+		LRK54_RS07780	0.76	-1.1
1,691,847	+		LRK54_RS07780	0.76	-1.9
1,691,847	+		LRK54_RS07780	0.76	-2.2
1,691,847	+		LRK54_RS07780	0.76	-0.5
1,691,847	+		LRK54_RS07780	0.76	-0.1
1,691,848	-		LRK54_RS07780	0.76	+0.2
1,691,848	-		LRK54_RS07780	0.76	-0.1
1,691,848	-		LRK54_RS07780	0.76	-1.1
1,691,848	-		LRK54_RS07780	0.76	+0.0
1,691,848	-		LRK54_RS07780	0.76	-0.7
1,691,848	-		LRK54_RS07780	0.76	+0.7
1,691,848	-		LRK54_RS07780	0.76	-0.9
1,691,848	-		LRK54_RS07780	0.76	+1.1
1,691,848	-		LRK54_RS07780	0.76	-0.3
1,691,848	-		LRK54_RS07780	0.76	-0.2
1,691,848	-		LRK54_RS07780	0.76	-0.6
1,691,848	-		LRK54_RS07780	0.76	-0.2
1,691,849	-		LRK54_RS07780	0.76	+1.3
1,691,868	+		LRK54_RS07780	0.78	-0.4
1,691,868	+		LRK54_RS07780	0.78	-1.0
1,691,868	+		LRK54_RS07780	0.78	+1.4
1,691,868	+		LRK54_RS07780	0.78	+0.4
1,691,868	+		LRK54_RS07780	0.78	+1.3
1,691,868	+		LRK54_RS07780	0.78	-1.2
1,691,868	+		LRK54_RS07780	0.78	-0.6
1,691,868	+		LRK54_RS07780	0.78	-0.6
1,691,868	+		LRK54_RS07780	0.78	-0.9
1,691,868	+		LRK54_RS07780	0.78	-3.2
1,691,868	+		LRK54_RS07780	0.78	-0.9
1,691,869	-		LRK54_RS07780	0.78	-0.6
1,691,869	-		LRK54_RS07780	0.78	+0.2
1,691,869	-		LRK54_RS07780	0.78	-0.8
1,691,869	-		LRK54_RS07780	0.78	-0.2
1,691,869	-		LRK54_RS07780	0.78	+0.9
1,691,869	-		LRK54_RS07780	0.78	+0.2
1,691,869	-		LRK54_RS07780	0.78	-0.4
1,691,869	-		LRK54_RS07780	0.78	-1.1
1,691,869	-		LRK54_RS07780	0.78	+0.3
1,691,869	-		LRK54_RS07780	0.78	+0.6
1,691,869	-		LRK54_RS07780	0.78	-1.0
1,691,869	-		LRK54_RS07780	0.78	+0.4
1,691,869	-		LRK54_RS07780	0.78	-1.5
1,691,869	-		LRK54_RS07780	0.78	+0.1
1,691,869	-		LRK54_RS07780	0.78	-0.6
1,691,869	-		LRK54_RS07780	0.78	+0.1
1,692,027	+		LRK54_RS07780	0.89	-1.0
1,692,027	+		LRK54_RS07780	0.89	-1.6
1,692,027	+		LRK54_RS07780	0.89	+0.5
1,692,027	+		LRK54_RS07780	0.89	-2.6
1,692,027	+		LRK54_RS07780	0.89	-1.9
1,692,027	+		LRK54_RS07780	0.89	-0.0
1,692,027	+		LRK54_RS07780	0.89	-2.8
1,692,028	-		LRK54_RS07780	0.89	+0.8
1,692,028	-		LRK54_RS07780	0.89	+1.0
1,692,028	-		LRK54_RS07780	0.89	+0.1
1,692,028	-		LRK54_RS07780	0.89	-1.4
1,692,028	-		LRK54_RS07780	0.89	-0.9
1,692,028	-		LRK54_RS07780	0.89	-0.6
1,692,286	+				+0.5
1,692,286	+				-0.1
1,692,287	-				-0.1
1,692,287	-				+0.1
1,692,287	-				-0.9
1,692,333	+		LRK54_RS07785	0.11	+1.2
1,692,333	+		LRK54_RS07785	0.11	-2.3
1,692,333	+		LRK54_RS07785	0.11	+0.4
1,692,333	+		LRK54_RS07785	0.11	-0.7
1,692,333	+		LRK54_RS07785	0.11	+0.6
1,692,333	+		LRK54_RS07785	0.11	-0.0
1,692,333	+		LRK54_RS07785	0.11	+0.1
1,692,333	+		LRK54_RS07785	0.11	-0.4
1,692,333	+		LRK54_RS07785	0.11	+0.1
1,692,333	+		LRK54_RS07785	0.11	-0.7
1,692,333	+		LRK54_RS07785	0.11	+0.8
1,692,333	+		LRK54_RS07785	0.11	+0.1
1,692,333	+		LRK54_RS07785	0.11	+0.9
1,692,333	+		LRK54_RS07785	0.11	+1.7
1,692,333	+		LRK54_RS07785	0.11	-1.0
1,692,334	-		LRK54_RS07785	0.11	-2.4
1,692,334	-		LRK54_RS07785	0.11	-0.7
1,692,334	-		LRK54_RS07785	0.11	-1.3
1,692,334	-		LRK54_RS07785	0.11	+0.3
1,692,334	-		LRK54_RS07785	0.11	+1.3
1,692,334	-		LRK54_RS07785	0.11	+0.5
1,692,334	-		LRK54_RS07785	0.11	-2.1
1,692,334	-		LRK54_RS07785	0.11	+0.1
1,692,334	-		LRK54_RS07785	0.11	-0.9
1,692,334	-		LRK54_RS07785	0.11	-1.8
1,692,334	-		LRK54_RS07785	0.11	-1.4
1,692,334	-		LRK54_RS07785	0.11	-0.3
1,692,334	-		LRK54_RS07785	0.11	+0.0
1,692,334	-		LRK54_RS07785	0.11	-0.9
1,692,354	+		LRK54_RS07785	0.13	+0.1
1,692,355	-		LRK54_RS07785	0.13	+1.3
1,692,355	-		LRK54_RS07785	0.13	+1.0
1,692,355	-		LRK54_RS07785	0.13	-0.1
1,692,355	-		LRK54_RS07785	0.13	+1.1
1,692,355	-		LRK54_RS07785	0.13	-0.8
1,692,355	-		LRK54_RS07785	0.13	+0.2
1,692,355	-		LRK54_RS07785	0.13	+0.4
1,692,375	+		LRK54_RS07785	0.15	+0.3
1,692,375	+		LRK54_RS07785	0.15	+3.5
1,692,375	+		LRK54_RS07785	0.15	-1.5
1,692,375	+		LRK54_RS07785	0.15	+0.6
1,692,375	+		LRK54_RS07785	0.15	-1.6
1,692,375	+		LRK54_RS07785	0.15	-0.5
1,692,375	+		LRK54_RS07785	0.15	-1.2
1,692,375	+		LRK54_RS07785	0.15	-2.0
1,692,375	+		LRK54_RS07785	0.15	+0.1
1,692,375	+		LRK54_RS07785	0.15	-0.8
1,692,375	+		LRK54_RS07785	0.15	+0.7
1,692,375	+		LRK54_RS07785	0.15	-0.5
1,692,375	+		LRK54_RS07785	0.15	+0.3
1,692,375	+		LRK54_RS07785	0.15	-0.1
1,692,375	+		LRK54_RS07785	0.15	+0.6
1,692,376	-		LRK54_RS07785	0.15	+0.1
1,692,376	-		LRK54_RS07785	0.15	-0.3
1,692,376	-		LRK54_RS07785	0.15	-0.5
1,692,376	-		LRK54_RS07785	0.15	-0.3
1,692,376	-		LRK54_RS07785	0.15	+0.0
1,692,376	-		LRK54_RS07785	0.15	+0.8
1,692,376	-		LRK54_RS07785	0.15	-0.4
1,692,376	-		LRK54_RS07785	0.15	+0.6
1,692,376	-		LRK54_RS07785	0.15	+0.9
1,692,376	-		LRK54_RS07785	0.15	-0.0
1,692,376	-		LRK54_RS07785	0.15	+0.8
1,692,376	-		LRK54_RS07785	0.15	+0.5
1,692,376	-		LRK54_RS07785	0.15	+0.7
1,692,564	+		LRK54_RS07785	0.30	-2.5
1,692,564	+		LRK54_RS07785	0.30	-0.2
1,692,564	+		LRK54_RS07785	0.30	+0.8
1,692,564	+		LRK54_RS07785	0.30	-1.1
1,692,564	+		LRK54_RS07785	0.30	-2.8
1,692,564	+		LRK54_RS07785	0.30	-0.2
1,692,564	+		LRK54_RS07785	0.30	-0.8
1,692,564	+		LRK54_RS07785	0.30	-1.8
1,692,564	+		LRK54_RS07785	0.30	+0.7
1,692,565	-		LRK54_RS07785	0.30	-1.6
1,692,565	-		LRK54_RS07785	0.30	+0.5
1,692,565	-		LRK54_RS07785	0.30	-0.4
1,692,565	-		LRK54_RS07785	0.30	+0.6
1,692,565	-		LRK54_RS07785	0.30	-0.9
1,692,565	-		LRK54_RS07785	0.30	+1.0
1,692,565	-		LRK54_RS07785	0.30	+0.7
1,692,636	+		LRK54_RS07785	0.36	-0.5
1,692,636	+		LRK54_RS07785	0.36	-0.3
1,692,636	+		LRK54_RS07785	0.36	+0.7
1,692,636	+		LRK54_RS07785	0.36	-0.8
1,692,637	-		LRK54_RS07785	0.37	-1.1
1,692,637	-		LRK54_RS07785	0.37	-0.6
1,692,750	+		LRK54_RS07785	0.46	-0.1
1,692,750	+		LRK54_RS07785	0.46	-2.3
1,692,750	+		LRK54_RS07785	0.46	+0.0
1,692,750	+		LRK54_RS07785	0.46	+0.9
1,692,751	-		LRK54_RS07785	0.46	-0.2
1,692,751	-		LRK54_RS07785	0.46	+0.1
1,692,751	-		LRK54_RS07785	0.46	-0.2
1,692,751	-		LRK54_RS07785	0.46	+0.1
1,692,751	-		LRK54_RS07785	0.46	+0.0
1,692,751	-		LRK54_RS07785	0.46	+0.1
1,692,751	-		LRK54_RS07785	0.46	-1.0
1,692,751	-		LRK54_RS07785	0.46	-0.4
1,692,751	-		LRK54_RS07785	0.46	-0.9
1,692,751	-		LRK54_RS07785	0.46	+1.0
1,692,751	-		LRK54_RS07785	0.46	-0.6
1,692,751	-		LRK54_RS07785	0.46	-1.5
1,692,751	-		LRK54_RS07785	0.46	+0.2
1,692,882	+		LRK54_RS07785	0.57	-0.9
1,692,882	+		LRK54_RS07785	0.57	+0.3
1,692,882	+		LRK54_RS07785	0.57	-1.3
1,692,882	+		LRK54_RS07785	0.57	-0.6
1,692,882	+		LRK54_RS07785	0.57	+0.6
1,692,882	+		LRK54_RS07785	0.57	-0.4
1,692,882	+		LRK54_RS07785	0.57	-0.4
1,692,882	+		LRK54_RS07785	0.57	-0.4
1,692,882	+		LRK54_RS07785	0.57	-0.6
1,692,882	+		LRK54_RS07785	0.57	-1.9
1,692,882	+		LRK54_RS07785	0.57	-1.7
1,692,882	+		LRK54_RS07785	0.57	-0.3
1,692,882	+		LRK54_RS07785	0.57	-0.3
1,692,882	+		LRK54_RS07785	0.57	-1.5
1,692,882	+		LRK54_RS07785	0.57	-0.8
1,692,882	+		LRK54_RS07785	0.57	-1.2
1,692,882	+		LRK54_RS07785	0.57	-1.3
1,692,882	+		LRK54_RS07785	0.57	-0.9
1,692,882	+		LRK54_RS07785	0.57	-2.0
1,692,882	+		LRK54_RS07785	0.57	+0.7
1,692,882	+		LRK54_RS07785	0.57	-0.3
1,692,882	+		LRK54_RS07785	0.57	+0.7
1,692,882	+		LRK54_RS07785	0.57	+0.0
1,692,882	+		LRK54_RS07785	0.57	+0.3
1,692,882	+		LRK54_RS07785	0.57	-2.0
1,692,883	-		LRK54_RS07785	0.57	-0.2
1,692,883	-		LRK54_RS07785	0.57	+0.2
1,692,883	-		LRK54_RS07785	0.57	-1.0
1,692,883	-		LRK54_RS07785	0.57	+1.5
1,692,883	-		LRK54_RS07785	0.57	-1.0
1,692,883	-		LRK54_RS07785	0.57	+0.4
1,692,883	-		LRK54_RS07785	0.57	+0.7
1,692,883	-		LRK54_RS07785	0.57	+0.0
1,692,883	-		LRK54_RS07785	0.57	-0.2
1,692,883	-		LRK54_RS07785	0.57	-0.7
1,692,883	-		LRK54_RS07785	0.57	-0.6
1,692,883	-		LRK54_RS07785	0.57	-0.3
1,692,883	-		LRK54_RS07785	0.57	-0.8
1,692,883	-		LRK54_RS07785	0.57	+0.1
1,692,883	-		LRK54_RS07785	0.57	+1.3
1,692,883	-		LRK54_RS07785	0.57	-0.1
1,692,883	-		LRK54_RS07785	0.57	-1.3
1,692,883	-		LRK54_RS07785	0.57	+0.7
1,692,883	-		LRK54_RS07785	0.57	+2.1
1,692,883	-		LRK54_RS07785	0.57	+0.5
1,692,883	-		LRK54_RS07785	0.57	-0.9
1,692,883	-		LRK54_RS07785	0.57	+0.1
1,692,883	-		LRK54_RS07785	0.57	-0.8
1,693,045	-		LRK54_RS07785	0.71	+0.4
1,693,045	-		LRK54_RS07785	0.71	+0.1
1,693,045	-		LRK54_RS07785	0.71	+1.0
1,693,062	+		LRK54_RS07785	0.72	-2.3
1,693,062	+		LRK54_RS07785	0.72	-1.1
1,693,062	+		LRK54_RS07785	0.72	-1.3
1,693,062	+		LRK54_RS07785	0.72	-0.5
1,693,062	+		LRK54_RS07785	0.72	-1.3
1,693,063	-		LRK54_RS07785	0.72	-2.1
1,693,063	-		LRK54_RS07785	0.72	-0.5
1,693,063	-		LRK54_RS07785	0.72	+1.4
1,693,063	-		LRK54_RS07785	0.72	+0.1
1,693,063	-		LRK54_RS07785	0.72	+0.0
1,693,063	-		LRK54_RS07785	0.72	-0.2
1,693,063	-		LRK54_RS07785	0.72	+0.7
1,693,063	-		LRK54_RS07785	0.72	+0.9
1,693,063	-		LRK54_RS07785	0.72	-0.1
1,693,063	-		LRK54_RS07785	0.72	+0.7
1,693,063	-		LRK54_RS07785	0.72	-0.3
1,693,063	-		LRK54_RS07785	0.72	-1.9
1,693,063	-		LRK54_RS07785	0.72	-0.9
1,693,063	-		LRK54_RS07785	0.72	-0.6
1,693,063	-		LRK54_RS07785	0.72	+0.1
1,693,063	-		LRK54_RS07785	0.72	+1.0
1,693,063	-		LRK54_RS07785	0.72	+0.9
1,693,063	-		LRK54_RS07785	0.72	+0.3
1,693,063	-		LRK54_RS07785	0.72	-1.1
1,693,063	-		LRK54_RS07785	0.72	+1.0
1,693,063	-		LRK54_RS07785	0.72	-0.6
1,693,063	-		LRK54_RS07785	0.72	-2.8
1,693,063	-		LRK54_RS07785	0.72	-0.2
1,693,075	+		LRK54_RS07785	0.73	-1.3
1,693,075	+		LRK54_RS07785	0.73	-2.7
1,693,075	+		LRK54_RS07785	0.73	-0.1
1,693,075	+		LRK54_RS07785	0.73	-0.3
1,693,075	+		LRK54_RS07785	0.73	-0.9
1,693,075	+		LRK54_RS07785	0.73	-0.6
1,693,075	+		LRK54_RS07785	0.73	-1.3
1,693,075	+		LRK54_RS07785	0.73	+1.2
1,693,075	+		LRK54_RS07785	0.73	+1.4
1,693,075	+		LRK54_RS07785	0.73	-0.9
1,693,075	+		LRK54_RS07785	0.73	-0.8
1,693,075	+		LRK54_RS07785	0.73	-1.7
1,693,076	-		LRK54_RS07785	0.73	-2.8
1,693,076	-		LRK54_RS07785	0.73	-1.4
1,693,076	-		LRK54_RS07785	0.73	+0.4
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