Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30340 and AO356_30345 are separated by 121 nucleotides AO356_30345 and AO356_30350 are separated by 193 nucleotides
AO356_30340: AO356_30340 - chemotaxis protein, at 7,081,517 to 7,083,469
_30340
AO356_30345: AO356_30345 - IclR family transcriptional regulator, at 7,083,591 to 7,084,343
_30345
AO356_30350: AO356_30350 - LysR family transcriptional regulator, at 7,084,537 to 7,085,469
_30350
Position (kb)
7083
7084
7085 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 7082.602 kb on + strand, within AO356_30340 at 7083.210 kb on + strand, within AO356_30340 at 7083.271 kb on - strand, within AO356_30340 at 7083.316 kb on + strand at 7083.356 kb on + strand at 7083.357 kb on - strand at 7083.357 kb on - strand at 7083.603 kb on - strand at 7083.603 kb on - strand at 7083.603 kb on - strand at 7083.603 kb on - strand at 7083.811 kb on + strand, within AO356_30345 at 7083.917 kb on + strand, within AO356_30345 at 7083.917 kb on + strand, within AO356_30345 at 7083.918 kb on - strand, within AO356_30345 at 7083.918 kb on - strand, within AO356_30345 at 7083.919 kb on + strand, within AO356_30345 at 7083.919 kb on + strand, within AO356_30345 at 7083.919 kb on + strand, within AO356_30345 at 7083.919 kb on + strand, within AO356_30345 at 7083.920 kb on - strand, within AO356_30345 at 7083.920 kb on - strand, within AO356_30345 at 7084.127 kb on + strand, within AO356_30345 at 7084.175 kb on - strand, within AO356_30345 at 7084.175 kb on - strand, within AO356_30345 at 7084.192 kb on - strand, within AO356_30345 at 7084.226 kb on + strand, within AO356_30345 at 7084.227 kb on - strand, within AO356_30345 at 7084.302 kb on - strand at 7084.325 kb on + strand at 7084.378 kb on + strand at 7084.443 kb on + strand at 7084.443 kb on + strand at 7084.444 kb on - strand at 7084.444 kb on - strand at 7084.444 kb on - strand at 7084.444 kb on - strand at 7084.444 kb on - strand at 7084.444 kb on - strand at 7084.446 kb on + strand at 7084.446 kb on + strand at 7084.446 kb on + strand at 7084.446 kb on + strand at 7084.446 kb on + strand at 7084.447 kb on - strand at 7084.447 kb on - strand at 7084.447 kb on - strand at 7084.447 kb on - strand at 7084.447 kb on - strand at 7084.447 kb on - strand at 7084.447 kb on - strand at 7084.593 kb on + strand at 7084.725 kb on + strand, within AO356_30350 at 7084.749 kb on + strand, within AO356_30350 at 7084.897 kb on + strand, within AO356_30350 at 7084.897 kb on + strand, within AO356_30350 at 7084.897 kb on + strand, within AO356_30350 at 7084.898 kb on - strand, within AO356_30350 at 7084.898 kb on - strand, within AO356_30350 at 7084.899 kb on + strand, within AO356_30350 at 7084.900 kb on - strand, within AO356_30350 at 7084.900 kb on - strand, within AO356_30350 at 7084.900 kb on - strand, within AO356_30350 at 7084.993 kb on + strand, within AO356_30350 at 7085.257 kb on + strand, within AO356_30350 at 7085.258 kb on - strand, within AO356_30350 at 7085.323 kb on + strand, within AO356_30350 at 7085.323 kb on + strand, within AO356_30350
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 7,082,602 + AO356_30340 0.56 -0.3 7,083,210 + AO356_30340 0.87 -0.3 7,083,271 - AO356_30340 0.90 -1.1 7,083,316 + -1.4 7,083,356 + -0.3 7,083,357 - +1.3 7,083,357 - +1.2 7,083,603 - -1.3 7,083,603 - +1.0 7,083,603 - +0.5 7,083,603 - +0.1 7,083,811 + AO356_30345 0.29 -2.3 7,083,917 + AO356_30345 0.43 -1.3 7,083,917 + AO356_30345 0.43 +0.3 7,083,918 - AO356_30345 0.43 +0.2 7,083,918 - AO356_30345 0.43 -1.4 7,083,919 + AO356_30345 0.44 -2.3 7,083,919 + AO356_30345 0.44 -0.5 7,083,919 + AO356_30345 0.44 -1.9 7,083,919 + AO356_30345 0.44 -1.5 7,083,920 - AO356_30345 0.44 +1.1 7,083,920 - AO356_30345 0.44 -1.7 7,084,127 + AO356_30345 0.71 -2.5 7,084,175 - AO356_30345 0.78 -2.2 7,084,175 - AO356_30345 0.78 -1.7 7,084,192 - AO356_30345 0.80 +0.6 7,084,226 + AO356_30345 0.84 -3.1 7,084,227 - AO356_30345 0.84 -2.3 7,084,302 - -1.3 7,084,325 + -1.7 7,084,378 + -0.7 7,084,443 + +0.8 7,084,443 + -0.3 7,084,444 - -1.6 7,084,444 - +0.6 7,084,444 - +1.6 7,084,444 - -0.1 7,084,444 - -0.5 7,084,444 - -0.5 7,084,446 + -0.4 7,084,446 + +0.1 7,084,446 + -1.6 7,084,446 + -0.7 7,084,446 + +0.0 7,084,447 - +0.6 7,084,447 - -0.7 7,084,447 - +0.2 7,084,447 - -0.2 7,084,447 - +0.5 7,084,447 - -2.6 7,084,447 - +0.6 7,084,593 + -0.4 7,084,725 + AO356_30350 0.20 +0.8 7,084,749 + AO356_30350 0.23 +0.8 7,084,897 + AO356_30350 0.39 +0.4 7,084,897 + AO356_30350 0.39 +2.6 7,084,897 + AO356_30350 0.39 +1.7 7,084,898 - AO356_30350 0.39 -0.1 7,084,898 - AO356_30350 0.39 -1.6 7,084,899 + AO356_30350 0.39 -0.5 7,084,900 - AO356_30350 0.39 -1.1 7,084,900 - AO356_30350 0.39 +1.1 7,084,900 - AO356_30350 0.39 +1.6 7,084,993 + AO356_30350 0.49 -0.3 7,085,257 + AO356_30350 0.77 -1.4 7,085,258 - AO356_30350 0.77 +1.2 7,085,323 + AO356_30350 0.84 +0.9 7,085,323 + AO356_30350 0.84 +0.2
Or see this region's nucleotide sequence