Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29275 and AO356_29280 are separated by 225 nucleotides AO356_29280 and AO356_29285 are separated by 127 nucleotides
AO356_29275: AO356_29275 - alkanesulfonate monooxygenase, at 6,808,395 to 6,809,483
_29275
AO356_29280: AO356_29280 - aldolase, at 6,809,709 to 6,810,503
_29280
AO356_29285: AO356_29285 - LysR family transcriptional regulator, at 6,810,631 to 6,811,536
_29285
Position (kb)
6809
6810
6811 Strain fitness (log2 ratio)
-2
-1
0
1 at 6808.753 kb on - strand, within AO356_29275 at 6808.791 kb on + strand, within AO356_29275 at 6808.791 kb on + strand, within AO356_29275 at 6808.906 kb on + strand, within AO356_29275 at 6808.914 kb on + strand, within AO356_29275 at 6808.915 kb on - strand, within AO356_29275 at 6809.344 kb on - strand, within AO356_29275 at 6809.407 kb on - strand at 6809.481 kb on + strand at 6809.481 kb on + strand at 6809.494 kb on - strand at 6809.497 kb on + strand at 6809.497 kb on + strand at 6809.498 kb on - strand at 6809.524 kb on + strand at 6810.039 kb on - strand, within AO356_29280 at 6810.149 kb on + strand, within AO356_29280 at 6810.215 kb on - strand, within AO356_29280 at 6810.215 kb on - strand, within AO356_29280 at 6810.367 kb on + strand, within AO356_29280 at 6810.367 kb on + strand, within AO356_29280 at 6810.367 kb on + strand, within AO356_29280 at 6810.368 kb on - strand, within AO356_29280 at 6810.368 kb on - strand, within AO356_29280 at 6810.368 kb on - strand, within AO356_29280 at 6810.527 kb on - strand at 6810.546 kb on - strand at 6810.733 kb on + strand, within AO356_29285 at 6810.734 kb on - strand, within AO356_29285 at 6810.978 kb on - strand, within AO356_29285 at 6811.180 kb on + strand, within AO356_29285 at 6811.180 kb on + strand, within AO356_29285 at 6811.180 kb on + strand, within AO356_29285 at 6811.226 kb on - strand, within AO356_29285 at 6811.344 kb on - strand, within AO356_29285
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 6,808,753 - AO356_29275 0.33 -0.5 6,808,791 + AO356_29275 0.36 -1.3 6,808,791 + AO356_29275 0.36 +0.5 6,808,906 + AO356_29275 0.47 +1.1 6,808,914 + AO356_29275 0.48 +0.1 6,808,915 - AO356_29275 0.48 -0.3 6,809,344 - AO356_29275 0.87 -0.0 6,809,407 - +1.2 6,809,481 + +0.8 6,809,481 + -1.5 6,809,494 - -1.3 6,809,497 + +0.4 6,809,497 + +0.1 6,809,498 - +0.8 6,809,524 + -0.5 6,810,039 - AO356_29280 0.42 -0.0 6,810,149 + AO356_29280 0.55 -0.9 6,810,215 - AO356_29280 0.64 +0.4 6,810,215 - AO356_29280 0.64 +0.3 6,810,367 + AO356_29280 0.83 +0.4 6,810,367 + AO356_29280 0.83 +0.4 6,810,367 + AO356_29280 0.83 +0.2 6,810,368 - AO356_29280 0.83 +0.1 6,810,368 - AO356_29280 0.83 +0.3 6,810,368 - AO356_29280 0.83 +0.4 6,810,527 - -1.8 6,810,546 - +1.1 6,810,733 + AO356_29285 0.11 -1.1 6,810,734 - AO356_29285 0.11 -0.2 6,810,978 - AO356_29285 0.38 -0.2 6,811,180 + AO356_29285 0.61 +0.1 6,811,180 + AO356_29285 0.61 -0.7 6,811,180 + AO356_29285 0.61 -0.0 6,811,226 - AO356_29285 0.66 +0.8 6,811,344 - AO356_29285 0.79 +0.0
Or see this region's nucleotide sequence