Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29000 and AO356_29005 are separated by 66 nucleotides AO356_29005 and AO356_29010 are separated by 78 nucleotides
AO356_29000: AO356_29000 - ABC transporter permease, at 6,740,374 to 6,741,708
_29000
AO356_29005: AO356_29005 - ABC transporter permease, at 6,741,775 to 6,743,115
_29005
AO356_29010: AO356_29010 - ABC transporter permease, at 6,743,194 to 6,744,258
_29010
Position (kb)
6741
6742
6743
6744 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6741.243 kb on - strand, within AO356_29000 at 6741.308 kb on + strand, within AO356_29000 at 6741.362 kb on + strand, within AO356_29000 at 6741.434 kb on + strand, within AO356_29000 at 6741.527 kb on + strand, within AO356_29000 at 6741.528 kb on - strand, within AO356_29000 at 6741.652 kb on - strand at 6741.653 kb on + strand at 6741.712 kb on + strand at 6741.807 kb on + strand at 6741.808 kb on - strand at 6742.139 kb on + strand, within AO356_29005 at 6742.140 kb on - strand, within AO356_29005 at 6742.140 kb on - strand, within AO356_29005 at 6742.140 kb on - strand, within AO356_29005 at 6742.143 kb on - strand, within AO356_29005 at 6742.158 kb on - strand, within AO356_29005 at 6742.500 kb on - strand, within AO356_29005 at 6742.545 kb on - strand, within AO356_29005 at 6742.619 kb on + strand, within AO356_29005 at 6742.619 kb on + strand, within AO356_29005 at 6742.646 kb on + strand, within AO356_29005 at 6742.649 kb on + strand, within AO356_29005 at 6742.829 kb on + strand, within AO356_29005 at 6742.829 kb on + strand, within AO356_29005 at 6743.040 kb on + strand at 6743.110 kb on - strand at 6743.123 kb on - strand at 6743.123 kb on - strand at 6743.579 kb on + strand, within AO356_29010 at 6743.792 kb on + strand, within AO356_29010 at 6743.792 kb on + strand, within AO356_29010 at 6743.792 kb on + strand, within AO356_29010 at 6743.793 kb on - strand, within AO356_29010 at 6743.793 kb on - strand, within AO356_29010 at 6743.798 kb on + strand, within AO356_29010 at 6743.798 kb on + strand, within AO356_29010 at 6743.799 kb on - strand, within AO356_29010 at 6743.867 kb on + strand, within AO356_29010 at 6743.988 kb on - strand, within AO356_29010 at 6743.988 kb on - strand, within AO356_29010
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 6,741,243 - AO356_29000 0.65 +0.3 6,741,308 + AO356_29000 0.70 +0.5 6,741,362 + AO356_29000 0.74 -0.5 6,741,434 + AO356_29000 0.79 -0.2 6,741,527 + AO356_29000 0.86 -0.4 6,741,528 - AO356_29000 0.86 +0.2 6,741,652 - +0.1 6,741,653 + -0.2 6,741,712 + +3.6 6,741,807 + -0.5 6,741,808 - -0.4 6,742,139 + AO356_29005 0.27 -1.0 6,742,140 - AO356_29005 0.27 +1.1 6,742,140 - AO356_29005 0.27 -1.2 6,742,140 - AO356_29005 0.27 -1.8 6,742,143 - AO356_29005 0.27 +0.0 6,742,158 - AO356_29005 0.29 +0.3 6,742,500 - AO356_29005 0.54 -1.3 6,742,545 - AO356_29005 0.57 -0.8 6,742,619 + AO356_29005 0.63 +0.2 6,742,619 + AO356_29005 0.63 -0.6 6,742,646 + AO356_29005 0.65 -0.5 6,742,649 + AO356_29005 0.65 -0.4 6,742,829 + AO356_29005 0.79 -1.3 6,742,829 + AO356_29005 0.79 -0.8 6,743,040 + -0.2 6,743,110 - +0.3 6,743,123 - -0.7 6,743,123 - -1.2 6,743,579 + AO356_29010 0.36 +0.6 6,743,792 + AO356_29010 0.56 -0.4 6,743,792 + AO356_29010 0.56 -0.4 6,743,792 + AO356_29010 0.56 -1.3 6,743,793 - AO356_29010 0.56 -0.8 6,743,793 - AO356_29010 0.56 -1.2 6,743,798 + AO356_29010 0.57 +0.5 6,743,798 + AO356_29010 0.57 -0.1 6,743,799 - AO356_29010 0.57 -0.8 6,743,867 + AO356_29010 0.63 +1.0 6,743,988 - AO356_29010 0.75 +0.0 6,743,988 - AO356_29010 0.75 -1.8
Or see this region's nucleotide sequence