Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28955
Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.016 vol% |
---|---|---|---|---|---|
remove | |||||
6,731,130 | + | AO356_28950 | 0.11 | -1.1 | |
6,731,328 | - | AO356_28950 | 0.33 | -1.0 | |
6,731,520 | - | AO356_28950 | 0.54 | -0.2 | |
6,731,520 | - | AO356_28950 | 0.54 | +0.5 | |
6,731,598 | + | AO356_28950 | 0.63 | -2.1 | |
6,731,633 | + | AO356_28950 | 0.67 | -0.2 | |
6,731,663 | + | AO356_28950 | 0.70 | +0.2 | |
6,731,664 | - | AO356_28950 | 0.70 | -1.1 | |
6,731,664 | - | AO356_28950 | 0.70 | -0.4 | |
6,731,664 | - | AO356_28950 | 0.70 | -1.1 | |
6,731,767 | + | AO356_28950 | 0.82 | +0.5 | |
6,731,768 | - | AO356_28950 | 0.82 | -0.9 | |
6,731,805 | + | AO356_28950 | 0.86 | -0.2 | |
6,731,806 | - | AO356_28950 | 0.86 | -0.2 | |
6,731,885 | + | +0.4 | |||
6,732,034 | - | +1.2 | |||
6,732,082 | + | AO356_28955 | 0.19 | -0.4 | |
6,732,141 | + | AO356_28955 | 0.40 | +0.3 | |
6,732,141 | + | AO356_28955 | 0.40 | +0.8 | |
6,732,142 | - | AO356_28955 | 0.41 | -0.3 | |
6,732,201 | + | AO356_28955 | 0.63 | +0.1 | |
6,732,333 | - | -0.9 | |||
6,732,354 | - | -0.2 | |||
6,732,354 | - | +0.8 | |||
6,732,533 | - | -0.3 | |||
6,732,533 | - | -0.6 | |||
6,732,533 | - | +0.4 | |||
6,732,533 | - | -0.3 | |||
6,732,536 | + | +0.7 | |||
6,732,566 | + | -0.2 | |||
6,733,029 | + | AO356_28960 | 0.81 | -2.8 |
Or see this region's nucleotide sequence