Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28855 and AO356_28860 overlap by 1 nucleotides AO356_28860 and AO356_28865 overlap by 32 nucleotides
AO356_28855: AO356_28855 - structural protein MipA, at 6,711,328 to 6,712,125
_28855
AO356_28860: AO356_28860 - transcriptional regulator, at 6,712,125 to 6,712,811
_28860
AO356_28865: AO356_28865 - histidine kinase, at 6,712,780 to 6,714,174
_28865
Position (kb)
6712
6713 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6711.194 kb on + strand at 6711.194 kb on + strand at 6711.195 kb on - strand at 6711.195 kb on - strand at 6711.195 kb on - strand at 6711.196 kb on + strand at 6711.261 kb on - strand at 6711.261 kb on - strand at 6711.264 kb on + strand at 6711.374 kb on + strand at 6711.375 kb on - strand at 6711.485 kb on - strand, within AO356_28855 at 6711.485 kb on - strand, within AO356_28855 at 6711.485 kb on - strand, within AO356_28855 at 6711.485 kb on - strand, within AO356_28855 at 6711.486 kb on + strand, within AO356_28855 at 6711.526 kb on + strand, within AO356_28855 at 6711.649 kb on + strand, within AO356_28855 at 6711.650 kb on - strand, within AO356_28855 at 6711.650 kb on - strand, within AO356_28855 at 6711.898 kb on + strand, within AO356_28855 at 6711.899 kb on - strand, within AO356_28855 at 6711.943 kb on + strand, within AO356_28855 at 6711.944 kb on - strand, within AO356_28855 at 6711.991 kb on + strand, within AO356_28855 at 6711.991 kb on + strand, within AO356_28855 at 6711.991 kb on + strand, within AO356_28855 at 6711.991 kb on + strand, within AO356_28855 at 6711.991 kb on + strand, within AO356_28855 at 6711.992 kb on - strand, within AO356_28855 at 6711.992 kb on - strand, within AO356_28855 at 6712.073 kb on + strand at 6712.073 kb on + strand at 6712.074 kb on - strand at 6712.109 kb on - strand at 6712.260 kb on + strand, within AO356_28860 at 6712.390 kb on + strand, within AO356_28860 at 6712.391 kb on - strand, within AO356_28860 at 6712.419 kb on + strand, within AO356_28860 at 6712.649 kb on - strand, within AO356_28860 at 6712.837 kb on + strand at 6712.838 kb on - strand at 6712.838 kb on - strand at 6712.838 kb on - strand at 6712.838 kb on - strand at 6713.029 kb on + strand, within AO356_28865 at 6713.029 kb on + strand, within AO356_28865 at 6713.185 kb on + strand, within AO356_28865 at 6713.185 kb on + strand, within AO356_28865 at 6713.185 kb on + strand, within AO356_28865 at 6713.185 kb on + strand, within AO356_28865 at 6713.186 kb on - strand, within AO356_28865 at 6713.353 kb on + strand, within AO356_28865 at 6713.353 kb on + strand, within AO356_28865 at 6713.353 kb on + strand, within AO356_28865 at 6713.354 kb on - strand, within AO356_28865 at 6713.354 kb on - strand, within AO356_28865 at 6713.370 kb on + strand, within AO356_28865 at 6713.457 kb on - strand, within AO356_28865 at 6713.711 kb on - strand, within AO356_28865 at 6713.713 kb on - strand, within AO356_28865 at 6713.713 kb on - strand, within AO356_28865 at 6713.761 kb on + strand, within AO356_28865 at 6713.765 kb on + strand, within AO356_28865 at 6713.765 kb on + strand, within AO356_28865 at 6713.765 kb on + strand, within AO356_28865 at 6713.766 kb on - strand, within AO356_28865 at 6713.766 kb on - strand, within AO356_28865 at 6713.792 kb on + strand, within AO356_28865 at 6713.793 kb on - strand, within AO356_28865 at 6713.793 kb on - strand, within AO356_28865
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 6,711,194 + +0.9 6,711,194 + +0.2 6,711,195 - +1.4 6,711,195 - -0.5 6,711,195 - +2.0 6,711,196 + +0.4 6,711,261 - -0.7 6,711,261 - +0.5 6,711,264 + +1.1 6,711,374 + +0.1 6,711,375 - -0.4 6,711,485 - AO356_28855 0.20 +0.2 6,711,485 - AO356_28855 0.20 +0.0 6,711,485 - AO356_28855 0.20 +0.7 6,711,485 - AO356_28855 0.20 -0.7 6,711,486 + AO356_28855 0.20 -0.4 6,711,526 + AO356_28855 0.25 +0.5 6,711,649 + AO356_28855 0.40 +1.2 6,711,650 - AO356_28855 0.40 +0.5 6,711,650 - AO356_28855 0.40 +0.3 6,711,898 + AO356_28855 0.71 +0.7 6,711,899 - AO356_28855 0.72 -0.4 6,711,943 + AO356_28855 0.77 +0.5 6,711,944 - AO356_28855 0.77 -0.3 6,711,991 + AO356_28855 0.83 -1.6 6,711,991 + AO356_28855 0.83 -1.5 6,711,991 + AO356_28855 0.83 -0.2 6,711,991 + AO356_28855 0.83 +1.0 6,711,991 + AO356_28855 0.83 +0.0 6,711,992 - AO356_28855 0.83 -0.7 6,711,992 - AO356_28855 0.83 +0.3 6,712,073 + -0.0 6,712,073 + +0.6 6,712,074 - +0.5 6,712,109 - +0.4 6,712,260 + AO356_28860 0.20 -0.2 6,712,390 + AO356_28860 0.39 +1.8 6,712,391 - AO356_28860 0.39 +0.1 6,712,419 + AO356_28860 0.43 -0.8 6,712,649 - AO356_28860 0.76 +0.4 6,712,837 + -0.6 6,712,838 - +0.4 6,712,838 - -0.7 6,712,838 - -0.2 6,712,838 - +0.9 6,713,029 + AO356_28865 0.18 -0.5 6,713,029 + AO356_28865 0.18 +0.8 6,713,185 + AO356_28865 0.29 +0.0 6,713,185 + AO356_28865 0.29 +2.0 6,713,185 + AO356_28865 0.29 -1.6 6,713,185 + AO356_28865 0.29 -0.2 6,713,186 - AO356_28865 0.29 -2.5 6,713,353 + AO356_28865 0.41 -2.0 6,713,353 + AO356_28865 0.41 -1.6 6,713,353 + AO356_28865 0.41 +0.3 6,713,354 - AO356_28865 0.41 -0.8 6,713,354 - AO356_28865 0.41 -0.4 6,713,370 + AO356_28865 0.42 +1.0 6,713,457 - AO356_28865 0.49 +0.3 6,713,711 - AO356_28865 0.67 -0.1 6,713,713 - AO356_28865 0.67 +0.9 6,713,713 - AO356_28865 0.67 -0.2 6,713,761 + AO356_28865 0.70 -0.1 6,713,765 + AO356_28865 0.71 +0.2 6,713,765 + AO356_28865 0.71 -1.2 6,713,765 + AO356_28865 0.71 -0.1 6,713,766 - AO356_28865 0.71 +1.5 6,713,766 - AO356_28865 0.71 -0.3 6,713,792 + AO356_28865 0.73 +0.3 6,713,793 - AO356_28865 0.73 -0.1 6,713,793 - AO356_28865 0.73 -1.0
Or see this region's nucleotide sequence