Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28535 and AO356_28540 are separated by 17 nucleotides AO356_28540 and AO356_28545 are separated by 78 nucleotides
AO356_28535: AO356_28535 - mannitol dehydrogenase, at 6,631,865 to 6,633,322
_28535
AO356_28540: AO356_28540 - D-mannose transporter (from data) , at 6,633,340 to 6,634,632
_28540
AO356_28545: AO356_28545 - alcohol dehydrogenase, at 6,634,711 to 6,635,742
_28545
Position (kb)
6633
6634
6635 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 6632.353 kb on - strand, within AO356_28535 at 6632.430 kb on + strand, within AO356_28535 at 6633.039 kb on + strand, within AO356_28535 at 6633.039 kb on + strand, within AO356_28535 at 6633.039 kb on + strand, within AO356_28535 at 6633.039 kb on + strand, within AO356_28535 at 6633.040 kb on - strand, within AO356_28535 at 6633.040 kb on - strand, within AO356_28535 at 6633.222 kb on + strand at 6633.422 kb on + strand at 6633.423 kb on - strand at 6633.620 kb on + strand, within AO356_28540 at 6633.621 kb on - strand, within AO356_28540 at 6633.638 kb on + strand, within AO356_28540 at 6633.687 kb on + strand, within AO356_28540 at 6633.687 kb on + strand, within AO356_28540 at 6633.688 kb on - strand, within AO356_28540 at 6633.688 kb on - strand, within AO356_28540 at 6633.899 kb on + strand, within AO356_28540 at 6633.935 kb on + strand, within AO356_28540 at 6633.935 kb on + strand, within AO356_28540 at 6633.936 kb on - strand, within AO356_28540 at 6633.936 kb on - strand, within AO356_28540 at 6633.936 kb on - strand, within AO356_28540 at 6633.936 kb on - strand, within AO356_28540 at 6633.939 kb on + strand, within AO356_28540 at 6633.940 kb on - strand, within AO356_28540 at 6633.941 kb on + strand, within AO356_28540 at 6634.134 kb on + strand, within AO356_28540 at 6634.134 kb on + strand, within AO356_28540 at 6634.157 kb on + strand, within AO356_28540 at 6634.157 kb on + strand, within AO356_28540 at 6634.260 kb on - strand, within AO356_28540 at 6634.467 kb on - strand, within AO356_28540 at 6634.572 kb on - strand at 6634.615 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 6,632,353 - AO356_28535 0.33 -0.2 6,632,430 + AO356_28535 0.39 +0.0 6,633,039 + AO356_28535 0.81 +0.5 6,633,039 + AO356_28535 0.81 -0.5 6,633,039 + AO356_28535 0.81 +1.7 6,633,039 + AO356_28535 0.81 -3.3 6,633,040 - AO356_28535 0.81 -0.1 6,633,040 - AO356_28535 0.81 +0.6 6,633,222 + -0.0 6,633,422 + -1.4 6,633,423 - +0.2 6,633,620 + AO356_28540 0.22 +0.3 6,633,621 - AO356_28540 0.22 -1.8 6,633,638 + AO356_28540 0.23 -0.3 6,633,687 + AO356_28540 0.27 +0.7 6,633,687 + AO356_28540 0.27 -0.0 6,633,688 - AO356_28540 0.27 -1.0 6,633,688 - AO356_28540 0.27 +0.6 6,633,899 + AO356_28540 0.43 +0.3 6,633,935 + AO356_28540 0.46 -1.3 6,633,935 + AO356_28540 0.46 -1.7 6,633,936 - AO356_28540 0.46 -2.8 6,633,936 - AO356_28540 0.46 +0.8 6,633,936 - AO356_28540 0.46 -0.9 6,633,936 - AO356_28540 0.46 -0.5 6,633,939 + AO356_28540 0.46 +1.1 6,633,940 - AO356_28540 0.46 +0.4 6,633,941 + AO356_28540 0.46 +0.8 6,634,134 + AO356_28540 0.61 -1.0 6,634,134 + AO356_28540 0.61 -1.5 6,634,157 + AO356_28540 0.63 +1.0 6,634,157 + AO356_28540 0.63 +0.4 6,634,260 - AO356_28540 0.71 +0.4 6,634,467 - AO356_28540 0.87 -0.0 6,634,572 - +0.5 6,634,615 - -0.3
Or see this region's nucleotide sequence