Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27175 and AO356_27180 are separated by 868 nucleotides AO356_27180 and AO356_27185 overlap by 4 nucleotides
AO356_27175: AO356_27175 - hypothetical protein, at 6,193,331 to 6,193,885
_27175
AO356_27180: AO356_27180 - hypothetical protein, at 6,194,754 to 6,195,989
_27180
AO356_27185: AO356_27185 - hypothetical protein, at 6,195,986 to 6,197,503
_27185
Position (kb)
6194
6195
6196 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6193.899 kb on - strand at 6193.943 kb on + strand at 6193.944 kb on - strand at 6193.944 kb on - strand at 6193.944 kb on - strand at 6193.949 kb on - strand at 6193.949 kb on - strand at 6193.949 kb on - strand at 6193.992 kb on + strand at 6193.992 kb on + strand at 6193.993 kb on - strand at 6193.993 kb on - strand at 6193.993 kb on - strand at 6193.993 kb on - strand at 6194.014 kb on - strand at 6194.081 kb on + strand at 6194.162 kb on - strand at 6194.206 kb on + strand at 6194.207 kb on - strand at 6194.207 kb on - strand at 6194.279 kb on - strand at 6194.279 kb on - strand at 6194.350 kb on + strand at 6194.351 kb on - strand at 6194.363 kb on - strand at 6194.384 kb on + strand at 6194.385 kb on - strand at 6194.427 kb on - strand at 6194.439 kb on + strand at 6194.450 kb on + strand at 6194.450 kb on + strand at 6194.450 kb on + strand at 6194.450 kb on + strand at 6194.450 kb on + strand at 6194.450 kb on + strand at 6194.451 kb on - strand at 6194.451 kb on - strand at 6194.451 kb on - strand at 6194.451 kb on - strand at 6194.473 kb on - strand at 6194.505 kb on + strand at 6194.638 kb on + strand at 6194.638 kb on + strand at 6194.638 kb on + strand at 6194.638 kb on + strand at 6194.639 kb on - strand at 6194.639 kb on - strand at 6194.639 kb on - strand at 6194.639 kb on - strand at 6194.662 kb on + strand at 6194.662 kb on + strand at 6194.756 kb on - strand at 6194.846 kb on + strand at 6194.941 kb on + strand, within AO356_27180 at 6195.076 kb on + strand, within AO356_27180 at 6195.077 kb on - strand, within AO356_27180 at 6195.437 kb on - strand, within AO356_27180 at 6195.793 kb on + strand, within AO356_27180 at 6195.989 kb on + strand at 6195.990 kb on - strand at 6196.089 kb on + strand at 6196.153 kb on - strand, within AO356_27185 at 6196.414 kb on + strand, within AO356_27185 at 6196.414 kb on + strand, within AO356_27185 at 6196.604 kb on - strand, within AO356_27185 at 6196.651 kb on + strand, within AO356_27185 at 6196.651 kb on + strand, within AO356_27185 at 6196.651 kb on + strand, within AO356_27185 at 6196.652 kb on - strand, within AO356_27185 at 6196.700 kb on - strand, within AO356_27185 at 6196.700 kb on - strand, within AO356_27185 at 6196.807 kb on - strand, within AO356_27185 at 6196.807 kb on - strand, within AO356_27185 at 6196.916 kb on - strand, within AO356_27185 at 6196.916 kb on - strand, within AO356_27185 at 6196.934 kb on + strand, within AO356_27185 at 6196.935 kb on - strand, within AO356_27185 at 6196.951 kb on - strand, within AO356_27185 at 6196.979 kb on - strand, within AO356_27185
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 6,193,899 - +0.1 6,193,943 + -0.9 6,193,944 - -0.1 6,193,944 - -0.0 6,193,944 - -1.5 6,193,949 - +0.1 6,193,949 - +0.0 6,193,949 - +1.1 6,193,992 + -0.0 6,193,992 + +0.3 6,193,993 - +0.9 6,193,993 - -2.1 6,193,993 - +1.3 6,193,993 - +0.4 6,194,014 - -0.2 6,194,081 + +0.8 6,194,162 - +1.0 6,194,206 + +0.8 6,194,207 - +0.6 6,194,207 - -0.4 6,194,279 - -0.6 6,194,279 - -0.3 6,194,350 + -0.4 6,194,351 - -0.2 6,194,363 - -0.9 6,194,384 + +0.4 6,194,385 - +1.8 6,194,427 - +0.1 6,194,439 + +1.8 6,194,450 + +1.7 6,194,450 + +0.0 6,194,450 + +1.1 6,194,450 + +0.4 6,194,450 + +1.1 6,194,450 + +0.8 6,194,451 - -1.0 6,194,451 - +1.2 6,194,451 - +0.7 6,194,451 - +1.9 6,194,473 - -0.1 6,194,505 + -0.1 6,194,638 + -0.9 6,194,638 + -0.1 6,194,638 + +0.2 6,194,638 + +0.8 6,194,639 - -0.6 6,194,639 - -1.2 6,194,639 - -2.1 6,194,639 - +0.7 6,194,662 + -0.2 6,194,662 + -0.3 6,194,756 - +0.3 6,194,846 + -1.0 6,194,941 + AO356_27180 0.15 -0.7 6,195,076 + AO356_27180 0.26 -2.1 6,195,077 - AO356_27180 0.26 -2.9 6,195,437 - AO356_27180 0.55 -0.3 6,195,793 + AO356_27180 0.84 -0.9 6,195,989 + -0.9 6,195,990 - +0.3 6,196,089 + +0.8 6,196,153 - AO356_27185 0.11 +0.2 6,196,414 + AO356_27185 0.28 -1.8 6,196,414 + AO356_27185 0.28 -1.6 6,196,604 - AO356_27185 0.41 +0.8 6,196,651 + AO356_27185 0.44 -0.4 6,196,651 + AO356_27185 0.44 -0.1 6,196,651 + AO356_27185 0.44 +2.1 6,196,652 - AO356_27185 0.44 +0.6 6,196,700 - AO356_27185 0.47 +0.5 6,196,700 - AO356_27185 0.47 +0.8 6,196,807 - AO356_27185 0.54 +0.5 6,196,807 - AO356_27185 0.54 +0.4 6,196,916 - AO356_27185 0.61 +0.6 6,196,916 - AO356_27185 0.61 +0.1 6,196,934 + AO356_27185 0.62 -0.3 6,196,935 - AO356_27185 0.63 +0.7 6,196,951 - AO356_27185 0.64 +0.2 6,196,979 - AO356_27185 0.65 +1.4
Or see this region's nucleotide sequence