Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26685 and AO356_26690 are separated by 75 nucleotides AO356_26690 and AO356_26695 overlap by 1 nucleotides AO356_26695 and AO356_26700 are separated by 72 nucleotides
AO356_26685: AO356_26685 - phosphate import ATP-binding protein PstB, at 6,076,190 to 6,076,951
_26685
AO356_26690: AO356_26690 - phosphate ABC transporter permease, at 6,077,027 to 6,077,938
_26690
AO356_26695: AO356_26695 - phosphate ABC transporter permease, at 6,077,938 to 6,078,903
_26695
AO356_26700: AO356_26700 - phosphate ABC transporter substrate-binding protein, at 6,078,976 to 6,080,007
_26700
Position (kb)
6077
6078
6079 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6076.956 kb on - strand at 6077.001 kb on - strand at 6077.029 kb on - strand at 6077.031 kb on + strand at 6077.031 kb on + strand at 6077.051 kb on - strand at 6077.062 kb on + strand at 6077.152 kb on - strand, within AO356_26690 at 6077.152 kb on - strand, within AO356_26690 at 6077.152 kb on - strand, within AO356_26690 at 6077.208 kb on + strand, within AO356_26690 at 6077.209 kb on - strand, within AO356_26690 at 6077.218 kb on - strand, within AO356_26690 at 6077.479 kb on + strand, within AO356_26690 at 6077.506 kb on - strand, within AO356_26690 at 6077.506 kb on - strand, within AO356_26690 at 6077.778 kb on + strand, within AO356_26690 at 6077.779 kb on - strand, within AO356_26690 at 6077.779 kb on - strand, within AO356_26690 at 6077.943 kb on + strand at 6077.943 kb on + strand at 6077.944 kb on - strand at 6077.960 kb on + strand at 6078.139 kb on + strand, within AO356_26695 at 6078.473 kb on + strand, within AO356_26695 at 6078.668 kb on + strand, within AO356_26695 at 6078.668 kb on + strand, within AO356_26695 at 6078.669 kb on - strand, within AO356_26695 at 6078.700 kb on + strand, within AO356_26695 at 6078.909 kb on - strand at 6079.152 kb on - strand, within AO356_26700 at 6079.338 kb on - strand, within AO356_26700 at 6079.368 kb on + strand, within AO356_26700 at 6079.368 kb on + strand, within AO356_26700 at 6079.369 kb on - strand, within AO356_26700 at 6079.369 kb on - strand, within AO356_26700 at 6079.653 kb on + strand, within AO356_26700 at 6079.673 kb on + strand, within AO356_26700 at 6079.674 kb on - strand, within AO356_26700 at 6079.830 kb on - strand, within AO356_26700 at 6079.883 kb on + strand, within AO356_26700 at 6079.883 kb on + strand, within AO356_26700 at 6079.883 kb on + strand, within AO356_26700 at 6079.884 kb on - strand, within AO356_26700
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 6,076,956 - -1.0 6,077,001 - +0.1 6,077,029 - +0.6 6,077,031 + +0.5 6,077,031 + +0.1 6,077,051 - -1.0 6,077,062 + +0.3 6,077,152 - AO356_26690 0.14 +0.7 6,077,152 - AO356_26690 0.14 -0.6 6,077,152 - AO356_26690 0.14 +1.7 6,077,208 + AO356_26690 0.20 +0.6 6,077,209 - AO356_26690 0.20 -0.3 6,077,218 - AO356_26690 0.21 -0.6 6,077,479 + AO356_26690 0.50 +0.2 6,077,506 - AO356_26690 0.53 +0.0 6,077,506 - AO356_26690 0.53 -0.4 6,077,778 + AO356_26690 0.82 +0.6 6,077,779 - AO356_26690 0.82 -0.6 6,077,779 - AO356_26690 0.82 -1.9 6,077,943 + -1.2 6,077,943 + -1.9 6,077,944 - -0.3 6,077,960 + +0.1 6,078,139 + AO356_26695 0.21 -0.6 6,078,473 + AO356_26695 0.55 -1.1 6,078,668 + AO356_26695 0.76 -1.2 6,078,668 + AO356_26695 0.76 -1.0 6,078,669 - AO356_26695 0.76 -0.1 6,078,700 + AO356_26695 0.79 +0.1 6,078,909 - +0.7 6,079,152 - AO356_26700 0.17 +0.3 6,079,338 - AO356_26700 0.35 -2.2 6,079,368 + AO356_26700 0.38 +0.1 6,079,368 + AO356_26700 0.38 +0.3 6,079,369 - AO356_26700 0.38 +2.4 6,079,369 - AO356_26700 0.38 -1.2 6,079,653 + AO356_26700 0.66 -0.5 6,079,673 + AO356_26700 0.68 +0.6 6,079,674 - AO356_26700 0.68 +1.0 6,079,830 - AO356_26700 0.83 +0.1 6,079,883 + AO356_26700 0.88 -0.5 6,079,883 + AO356_26700 0.88 -0.3 6,079,883 + AO356_26700 0.88 -0.9 6,079,884 - AO356_26700 0.88 -0.6
Or see this region's nucleotide sequence