Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24960 and AO356_24965 are separated by 112 nucleotides AO356_24965 and AO356_24970 are separated by 141 nucleotides
AO356_24960: AO356_24960 - hydroxyproline-2-epimerase, at 5,654,494 to 5,655,426
_24960
AO356_24965: AO356_24965 - GntR family transcriptional regulator, at 5,655,539 to 5,656,210
_24965
AO356_24970: AO356_24970 - MFS transporter, at 5,656,352 to 5,657,518
_24970
Position (kb) 5655
5656
5657 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5654.561 kb on + strand at 5654.736 kb on - strand, within AO356_24960 at 5654.736 kb on - strand, within AO356_24960 at 5654.802 kb on + strand, within AO356_24960 at 5654.860 kb on + strand, within AO356_24960 at 5654.867 kb on + strand, within AO356_24960 at 5654.867 kb on + strand, within AO356_24960 at 5654.867 kb on + strand, within AO356_24960 at 5654.868 kb on - strand, within AO356_24960 at 5655.017 kb on + strand, within AO356_24960 at 5655.499 kb on + strand at 5655.500 kb on - strand at 5655.712 kb on - strand, within AO356_24965 at 5655.712 kb on - strand, within AO356_24965 at 5656.203 kb on - strand at 5656.230 kb on + strand at 5656.245 kb on + strand at 5656.245 kb on + strand at 5656.245 kb on + strand at 5656.247 kb on + strand at 5656.248 kb on - strand at 5656.377 kb on + strand at 5656.377 kb on + strand at 5656.377 kb on + strand at 5656.377 kb on + strand at 5656.378 kb on - strand at 5656.378 kb on - strand at 5656.378 kb on - strand at 5656.518 kb on + strand, within AO356_24970 at 5656.519 kb on - strand, within AO356_24970 at 5656.611 kb on + strand, within AO356_24970 at 5656.611 kb on + strand, within AO356_24970 at 5656.692 kb on + strand, within AO356_24970 at 5656.692 kb on + strand, within AO356_24970 at 5656.692 kb on + strand, within AO356_24970 at 5656.692 kb on + strand, within AO356_24970 at 5656.693 kb on - strand, within AO356_24970 at 5656.693 kb on - strand, within AO356_24970 at 5656.693 kb on - strand, within AO356_24970 at 5656.847 kb on + strand, within AO356_24970 at 5656.847 kb on + strand, within AO356_24970 at 5656.848 kb on - strand, within AO356_24970 at 5656.848 kb on - strand, within AO356_24970 at 5656.883 kb on + strand, within AO356_24970 at 5656.884 kb on - strand, within AO356_24970 at 5657.165 kb on - strand, within AO356_24970 at 5657.166 kb on + strand, within AO356_24970 at 5657.166 kb on + strand, within AO356_24970 at 5657.166 kb on + strand, within AO356_24970 at 5657.167 kb on - strand, within AO356_24970
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 5,654,561 + -0.2 5,654,736 - AO356_24960 0.26 +0.2 5,654,736 - AO356_24960 0.26 -1.9 5,654,802 + AO356_24960 0.33 +0.0 5,654,860 + AO356_24960 0.39 -0.1 5,654,867 + AO356_24960 0.40 +0.2 5,654,867 + AO356_24960 0.40 -0.3 5,654,867 + AO356_24960 0.40 -0.8 5,654,868 - AO356_24960 0.40 +0.2 5,655,017 + AO356_24960 0.56 +0.5 5,655,499 + +1.2 5,655,500 - +0.7 5,655,712 - AO356_24965 0.26 +1.5 5,655,712 - AO356_24965 0.26 +0.2 5,656,203 - +1.8 5,656,230 + +0.2 5,656,245 + -2.7 5,656,245 + -1.6 5,656,245 + +1.2 5,656,247 + +0.0 5,656,248 - -2.2 5,656,377 + +0.4 5,656,377 + -1.3 5,656,377 + -2.5 5,656,377 + +0.2 5,656,378 - +0.1 5,656,378 - -1.3 5,656,378 - -0.3 5,656,518 + AO356_24970 0.14 -0.1 5,656,519 - AO356_24970 0.14 -0.4 5,656,611 + AO356_24970 0.22 -0.9 5,656,611 + AO356_24970 0.22 +0.5 5,656,692 + AO356_24970 0.29 +1.2 5,656,692 + AO356_24970 0.29 -0.3 5,656,692 + AO356_24970 0.29 -0.3 5,656,692 + AO356_24970 0.29 -0.5 5,656,693 - AO356_24970 0.29 -1.0 5,656,693 - AO356_24970 0.29 -2.1 5,656,693 - AO356_24970 0.29 +0.6 5,656,847 + AO356_24970 0.42 +0.1 5,656,847 + AO356_24970 0.42 -0.5 5,656,848 - AO356_24970 0.43 -0.1 5,656,848 - AO356_24970 0.43 +1.0 5,656,883 + AO356_24970 0.46 +1.2 5,656,884 - AO356_24970 0.46 +0.1 5,657,165 - AO356_24970 0.70 -1.9 5,657,166 + AO356_24970 0.70 +0.4 5,657,166 + AO356_24970 0.70 -0.3 5,657,166 + AO356_24970 0.70 -0.0 5,657,167 - AO356_24970 0.70 -0.3
Or see this region's nucleotide sequence