Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24655 and AO356_24660 overlap by 4 nucleotides AO356_24660 and AO356_24665 are separated by 9 nucleotides AO356_24665 and AO356_24670 are separated by 600 nucleotides
AO356_24655: AO356_24655 - hypothetical protein, at 5,576,760 to 5,577,254
_24655
AO356_24660: AO356_24660 - hypothetical protein, at 5,577,251 to 5,578,195
_24660
AO356_24665: AO356_24665 - AAA family ATPase, at 5,578,205 to 5,579,164
_24665
AO356_24670: AO356_24670 - hypothetical protein, at 5,579,765 to 5,580,133
_24670
Position (kb) 5578
5579
5580 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5577.286 kb on - strand at 5577.294 kb on - strand at 5577.320 kb on - strand at 5578.492 kb on - strand, within AO356_24665 at 5578.515 kb on + strand, within AO356_24665 at 5578.516 kb on - strand, within AO356_24665 at 5578.701 kb on + strand, within AO356_24665 at 5578.764 kb on + strand, within AO356_24665 at 5578.764 kb on + strand, within AO356_24665 at 5578.764 kb on + strand, within AO356_24665 at 5578.764 kb on + strand, within AO356_24665 at 5578.764 kb on + strand, within AO356_24665 at 5578.765 kb on - strand, within AO356_24665 at 5578.765 kb on - strand, within AO356_24665 at 5579.053 kb on + strand, within AO356_24665 at 5579.054 kb on - strand, within AO356_24665 at 5579.054 kb on - strand, within AO356_24665 at 5579.054 kb on - strand, within AO356_24665 at 5579.054 kb on - strand, within AO356_24665 at 5579.439 kb on + strand at 5579.439 kb on + strand at 5579.440 kb on - strand at 5579.440 kb on - strand at 5579.440 kb on - strand at 5579.440 kb on - strand at 5579.460 kb on + strand at 5579.483 kb on - strand at 5579.699 kb on + strand at 5579.776 kb on - strand at 5579.870 kb on + strand, within AO356_24670 at 5579.871 kb on - strand, within AO356_24670 at 5580.131 kb on + strand at 5580.131 kb on + strand at 5580.132 kb on - strand at 5580.150 kb on + strand at 5580.151 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 5,577,286 - +1.3 5,577,294 - +0.6 5,577,320 - -1.5 5,578,492 - AO356_24665 0.30 -0.8 5,578,515 + AO356_24665 0.32 +0.5 5,578,516 - AO356_24665 0.32 -0.9 5,578,701 + AO356_24665 0.52 -2.2 5,578,764 + AO356_24665 0.58 -3.6 5,578,764 + AO356_24665 0.58 -2.9 5,578,764 + AO356_24665 0.58 -3.3 5,578,764 + AO356_24665 0.58 -2.0 5,578,764 + AO356_24665 0.58 -0.8 5,578,765 - AO356_24665 0.58 +0.1 5,578,765 - AO356_24665 0.58 +0.1 5,579,053 + AO356_24665 0.88 -1.4 5,579,054 - AO356_24665 0.88 -0.3 5,579,054 - AO356_24665 0.88 -2.1 5,579,054 - AO356_24665 0.88 -1.4 5,579,054 - AO356_24665 0.88 -1.0 5,579,439 + -1.4 5,579,439 + +0.1 5,579,440 - +1.4 5,579,440 - +0.8 5,579,440 - -0.0 5,579,440 - +0.5 5,579,460 + -0.4 5,579,483 - +0.5 5,579,699 + +0.1 5,579,776 - +0.2 5,579,870 + AO356_24670 0.28 -0.7 5,579,871 - AO356_24670 0.29 -0.4 5,580,131 + -0.4 5,580,131 + +0.5 5,580,132 - +0.1 5,580,150 + -0.4 5,580,151 - +0.5
Or see this region's nucleotide sequence