Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24640 and AO356_24645 overlap by 4 nucleotides AO356_24645 and AO356_24650 overlap by 4 nucleotides
AO356_24640: AO356_24640 - protein BatD, at 5,572,321 to 5,573,958
_24640
AO356_24645: AO356_24645 - hypothetical protein, at 5,573,955 to 5,575,691
_24645
AO356_24650: AO356_24650 - BatB protein, at 5,575,688 to 5,576,767
_24650
Position (kb) 5573
5574
5575
5576 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5573.345 kb on + strand, within AO356_24640 at 5573.346 kb on - strand, within AO356_24640 at 5573.346 kb on - strand, within AO356_24640 at 5573.402 kb on + strand, within AO356_24640 at 5573.403 kb on - strand, within AO356_24640 at 5573.492 kb on + strand, within AO356_24640 at 5573.493 kb on - strand, within AO356_24640 at 5573.493 kb on - strand, within AO356_24640 at 5573.493 kb on - strand, within AO356_24640 at 5573.528 kb on + strand, within AO356_24640 at 5573.528 kb on + strand, within AO356_24640 at 5573.528 kb on + strand, within AO356_24640 at 5573.528 kb on + strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5574.005 kb on + strand at 5574.472 kb on + strand, within AO356_24645 at 5574.523 kb on + strand, within AO356_24645 at 5574.523 kb on + strand, within AO356_24645 at 5574.524 kb on - strand, within AO356_24645 at 5574.967 kb on + strand, within AO356_24645 at 5574.967 kb on + strand, within AO356_24645 at 5574.967 kb on + strand, within AO356_24645 at 5574.968 kb on - strand, within AO356_24645 at 5574.968 kb on - strand, within AO356_24645 at 5574.968 kb on - strand, within AO356_24645 at 5575.276 kb on + strand, within AO356_24645 at 5575.277 kb on - strand, within AO356_24645 at 5575.326 kb on + strand, within AO356_24645 at 5575.399 kb on - strand, within AO356_24645 at 5575.820 kb on + strand, within AO356_24650 at 5575.820 kb on + strand, within AO356_24650 at 5575.820 kb on + strand, within AO356_24650 at 5575.821 kb on - strand, within AO356_24650 at 5575.821 kb on - strand, within AO356_24650 at 5575.858 kb on - strand, within AO356_24650 at 5575.858 kb on - strand, within AO356_24650 at 5575.966 kb on - strand, within AO356_24650 at 5576.138 kb on + strand, within AO356_24650 at 5576.139 kb on - strand, within AO356_24650 at 5576.331 kb on + strand, within AO356_24650 at 5576.582 kb on - strand, within AO356_24650
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 5,573,345 + AO356_24640 0.63 -0.9 5,573,346 - AO356_24640 0.63 -0.3 5,573,346 - AO356_24640 0.63 -3.5 5,573,402 + AO356_24640 0.66 -2.2 5,573,403 - AO356_24640 0.66 +0.6 5,573,492 + AO356_24640 0.71 -1.7 5,573,493 - AO356_24640 0.72 -2.7 5,573,493 - AO356_24640 0.72 -1.8 5,573,493 - AO356_24640 0.72 -1.2 5,573,528 + AO356_24640 0.74 -3.5 5,573,528 + AO356_24640 0.74 -3.3 5,573,528 + AO356_24640 0.74 -0.0 5,573,528 + AO356_24640 0.74 -1.4 5,573,529 - AO356_24640 0.74 -1.5 5,573,529 - AO356_24640 0.74 -1.5 5,573,529 - AO356_24640 0.74 +0.5 5,573,529 - AO356_24640 0.74 -0.7 5,573,529 - AO356_24640 0.74 -0.0 5,573,529 - AO356_24640 0.74 -2.0 5,574,005 + -1.3 5,574,472 + AO356_24645 0.30 -1.0 5,574,523 + AO356_24645 0.33 +0.0 5,574,523 + AO356_24645 0.33 -1.5 5,574,524 - AO356_24645 0.33 -1.4 5,574,967 + AO356_24645 0.58 -1.3 5,574,967 + AO356_24645 0.58 -1.8 5,574,967 + AO356_24645 0.58 -3.0 5,574,968 - AO356_24645 0.58 -0.3 5,574,968 - AO356_24645 0.58 -2.4 5,574,968 - AO356_24645 0.58 -0.5 5,575,276 + AO356_24645 0.76 -2.4 5,575,277 - AO356_24645 0.76 -2.3 5,575,326 + AO356_24645 0.79 +0.3 5,575,399 - AO356_24645 0.83 -1.2 5,575,820 + AO356_24650 0.12 -2.6 5,575,820 + AO356_24650 0.12 -2.4 5,575,820 + AO356_24650 0.12 -1.5 5,575,821 - AO356_24650 0.12 -0.9 5,575,821 - AO356_24650 0.12 +0.8 5,575,858 - AO356_24650 0.16 -2.4 5,575,858 - AO356_24650 0.16 -0.3 5,575,966 - AO356_24650 0.26 -3.6 5,576,138 + AO356_24650 0.42 -1.1 5,576,139 - AO356_24650 0.42 +0.5 5,576,331 + AO356_24650 0.60 -1.6 5,576,582 - AO356_24650 0.83 -1.4
Or see this region's nucleotide sequence