Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24545 and AO356_24550 are separated by 45 nucleotides AO356_24550 and AO356_24555 overlap by 4 nucleotides AO356_24555 and AO356_24560 are separated by 13 nucleotides
AO356_24545: AO356_24545 - peptidase S54, at 5,543,429 to 5,544,301
_24545
AO356_24550: AO356_24550 - hypothetical protein, at 5,544,347 to 5,544,607
_24550
AO356_24555: AO356_24555 - hypothetical protein, at 5,544,604 to 5,545,434
_24555
AO356_24560: AO356_24560 - aminopeptidase, at 5,545,448 to 5,548,105
_24560
Position (kb) 5544
5545
5546 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5543.766 kb on + strand, within AO356_24545 at 5543.766 kb on + strand, within AO356_24545 at 5543.807 kb on + strand, within AO356_24545 at 5543.808 kb on - strand, within AO356_24545 at 5543.808 kb on - strand, within AO356_24545 at 5544.092 kb on + strand, within AO356_24545 at 5544.092 kb on + strand, within AO356_24545 at 5544.120 kb on - strand, within AO356_24545 at 5544.120 kb on - strand, within AO356_24545 at 5544.286 kb on + strand at 5544.388 kb on + strand, within AO356_24550 at 5544.393 kb on - strand, within AO356_24550 at 5544.670 kb on + strand at 5544.671 kb on - strand at 5544.740 kb on - strand, within AO356_24555 at 5544.808 kb on + strand, within AO356_24555 at 5545.363 kb on + strand at 5545.399 kb on - strand at 5545.399 kb on - strand at 5545.403 kb on - strand at 5545.411 kb on + strand at 5545.432 kb on + strand at 5545.432 kb on + strand at 5545.433 kb on - strand at 5545.433 kb on - strand at 5545.475 kb on + strand at 5545.487 kb on + strand at 5545.488 kb on - strand at 5545.686 kb on - strand at 5545.736 kb on - strand, within AO356_24560 at 5545.794 kb on - strand, within AO356_24560 at 5545.853 kb on + strand, within AO356_24560 at 5545.853 kb on + strand, within AO356_24560 at 5545.853 kb on + strand, within AO356_24560 at 5545.853 kb on + strand, within AO356_24560 at 5545.853 kb on + strand, within AO356_24560 at 5545.853 kb on + strand, within AO356_24560 at 5545.853 kb on + strand, within AO356_24560 at 5545.853 kb on + strand, within AO356_24560 at 5545.853 kb on + strand, within AO356_24560 at 5545.853 kb on + strand, within AO356_24560 at 5545.854 kb on - strand, within AO356_24560 at 5545.854 kb on - strand, within AO356_24560 at 5545.854 kb on - strand, within AO356_24560 at 5545.854 kb on - strand, within AO356_24560 at 5545.857 kb on - strand, within AO356_24560 at 5545.920 kb on - strand, within AO356_24560 at 5546.086 kb on + strand, within AO356_24560 at 5546.087 kb on - strand, within AO356_24560 at 5546.106 kb on - strand, within AO356_24560 at 5546.198 kb on + strand, within AO356_24560 at 5546.198 kb on + strand, within AO356_24560 at 5546.272 kb on + strand, within AO356_24560 at 5546.272 kb on + strand, within AO356_24560 at 5546.273 kb on - strand, within AO356_24560 at 5546.273 kb on - strand, within AO356_24560 at 5546.369 kb on - strand, within AO356_24560 at 5546.369 kb on - strand, within AO356_24560
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 5,543,766 + AO356_24545 0.39 +0.9 5,543,766 + AO356_24545 0.39 +1.4 5,543,807 + AO356_24545 0.43 +0.8 5,543,808 - AO356_24545 0.43 +2.5 5,543,808 - AO356_24545 0.43 -0.1 5,544,092 + AO356_24545 0.76 +1.5 5,544,092 + AO356_24545 0.76 -1.3 5,544,120 - AO356_24545 0.79 +0.3 5,544,120 - AO356_24545 0.79 +1.6 5,544,286 + +1.4 5,544,388 + AO356_24550 0.16 +1.5 5,544,393 - AO356_24550 0.18 +1.1 5,544,670 + +0.1 5,544,671 - +0.7 5,544,740 - AO356_24555 0.16 +1.5 5,544,808 + AO356_24555 0.25 +0.6 5,545,363 + -1.1 5,545,399 - +2.4 5,545,399 - +1.1 5,545,403 - -0.5 5,545,411 + -0.0 5,545,432 + +0.6 5,545,432 + +0.1 5,545,433 - +0.4 5,545,433 - -0.7 5,545,475 + -0.1 5,545,487 + +0.1 5,545,488 - -0.2 5,545,686 - +0.4 5,545,736 - AO356_24560 0.11 +0.8 5,545,794 - AO356_24560 0.13 +0.4 5,545,853 + AO356_24560 0.15 -1.2 5,545,853 + AO356_24560 0.15 +0.4 5,545,853 + AO356_24560 0.15 -0.2 5,545,853 + AO356_24560 0.15 +1.3 5,545,853 + AO356_24560 0.15 +0.9 5,545,853 + AO356_24560 0.15 +0.3 5,545,853 + AO356_24560 0.15 +0.5 5,545,853 + AO356_24560 0.15 -0.8 5,545,853 + AO356_24560 0.15 -0.7 5,545,853 + AO356_24560 0.15 +0.4 5,545,854 - AO356_24560 0.15 -0.0 5,545,854 - AO356_24560 0.15 +1.0 5,545,854 - AO356_24560 0.15 +0.9 5,545,854 - AO356_24560 0.15 -1.5 5,545,857 - AO356_24560 0.15 +0.6 5,545,920 - AO356_24560 0.18 +0.5 5,546,086 + AO356_24560 0.24 -0.8 5,546,087 - AO356_24560 0.24 +0.7 5,546,106 - AO356_24560 0.25 +1.4 5,546,198 + AO356_24560 0.28 -2.5 5,546,198 + AO356_24560 0.28 +0.7 5,546,272 + AO356_24560 0.31 -0.2 5,546,272 + AO356_24560 0.31 -0.1 5,546,273 - AO356_24560 0.31 -0.1 5,546,273 - AO356_24560 0.31 +1.4 5,546,369 - AO356_24560 0.35 +0.8 5,546,369 - AO356_24560 0.35 +1.3
Or see this region's nucleotide sequence