Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23550 and AO356_23555 are separated by 7 nucleotides AO356_23555 and AO356_23560 are separated by 52 nucleotides AO356_23560 and AO356_23565 are separated by 102 nucleotides
AO356_23550: AO356_23550 - aliphatic sulfonate ABC transporter substrate-binding protein, at 5,279,338 to 5,280,339
_23550
AO356_23555: AO356_23555 - ABC transporter permease, at 5,280,347 to 5,281,096
_23555
AO356_23560: AO356_23560 - hypothetical protein, at 5,281,149 to 5,283,518
_23560
AO356_23565: AO356_23565 - peptidase, at 5,283,621 to 5,285,405
_23565
Position (kb)
5281
5282
5283
5284 Strain fitness (log2 ratio)
-2
-1
0
1 at 5280.310 kb on - strand at 5280.316 kb on + strand at 5280.317 kb on - strand at 5280.434 kb on + strand, within AO356_23555 at 5280.434 kb on + strand, within AO356_23555 at 5280.434 kb on + strand, within AO356_23555 at 5280.434 kb on + strand, within AO356_23555 at 5280.435 kb on - strand, within AO356_23555 at 5280.435 kb on - strand, within AO356_23555 at 5280.696 kb on - strand, within AO356_23555 at 5280.842 kb on + strand, within AO356_23555 at 5281.073 kb on + strand at 5281.094 kb on + strand at 5281.095 kb on - strand at 5281.095 kb on - strand at 5281.185 kb on + strand at 5281.185 kb on + strand at 5281.185 kb on + strand at 5281.185 kb on + strand at 5281.186 kb on - strand at 5281.186 kb on - strand at 5281.186 kb on - strand at 5281.300 kb on - strand at 5281.359 kb on + strand at 5281.408 kb on - strand, within AO356_23560 at 5281.408 kb on - strand, within AO356_23560 at 5281.408 kb on - strand, within AO356_23560 at 5281.408 kb on - strand, within AO356_23560 at 5281.422 kb on + strand, within AO356_23560 at 5282.109 kb on + strand, within AO356_23560 at 5282.109 kb on + strand, within AO356_23560 at 5282.110 kb on - strand, within AO356_23560 at 5282.110 kb on - strand, within AO356_23560 at 5282.110 kb on - strand, within AO356_23560 at 5282.110 kb on - strand, within AO356_23560 at 5282.110 kb on - strand, within AO356_23560 at 5282.110 kb on - strand, within AO356_23560 at 5282.122 kb on - strand, within AO356_23560 at 5282.178 kb on - strand, within AO356_23560 at 5282.430 kb on + strand, within AO356_23560 at 5282.430 kb on + strand, within AO356_23560 at 5282.431 kb on - strand, within AO356_23560 at 5282.431 kb on - strand, within AO356_23560 at 5282.440 kb on - strand, within AO356_23560 at 5283.013 kb on - strand, within AO356_23560 at 5283.193 kb on + strand, within AO356_23560 at 5283.194 kb on - strand, within AO356_23560 at 5283.219 kb on + strand, within AO356_23560 at 5283.219 kb on + strand, within AO356_23560 at 5283.219 kb on + strand, within AO356_23560 at 5283.219 kb on + strand, within AO356_23560 at 5283.220 kb on - strand, within AO356_23560 at 5283.220 kb on - strand, within AO356_23560 at 5283.255 kb on + strand, within AO356_23560 at 5283.255 kb on + strand, within AO356_23560 at 5283.255 kb on + strand, within AO356_23560 at 5283.255 kb on + strand, within AO356_23560 at 5283.255 kb on + strand, within AO356_23560 at 5283.583 kb on + strand at 5283.583 kb on + strand at 5283.583 kb on + strand at 5283.583 kb on + strand at 5283.584 kb on - strand at 5283.584 kb on - strand at 5283.584 kb on - strand at 5283.584 kb on - strand at 5283.738 kb on + strand at 5283.738 kb on + strand at 5283.738 kb on + strand at 5283.738 kb on + strand at 5283.738 kb on + strand at 5283.738 kb on + strand at 5283.738 kb on + strand at 5283.739 kb on - strand at 5283.739 kb on - strand at 5283.739 kb on - strand at 5283.739 kb on - strand at 5283.739 kb on - strand at 5283.740 kb on + strand at 5283.741 kb on - strand at 5283.753 kb on + strand at 5283.754 kb on - strand at 5284.054 kb on - strand, within AO356_23565 at 5284.297 kb on + strand, within AO356_23565 at 5284.297 kb on + strand, within AO356_23565 at 5284.297 kb on + strand, within AO356_23565 at 5284.297 kb on + strand, within AO356_23565 at 5284.402 kb on - strand, within AO356_23565
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 5,280,310 - -0.1 5,280,316 + -0.9 5,280,317 - +0.6 5,280,434 + AO356_23555 0.12 +0.9 5,280,434 + AO356_23555 0.12 +0.5 5,280,434 + AO356_23555 0.12 +0.8 5,280,434 + AO356_23555 0.12 +1.5 5,280,435 - AO356_23555 0.12 +0.2 5,280,435 - AO356_23555 0.12 +0.1 5,280,696 - AO356_23555 0.47 +0.1 5,280,842 + AO356_23555 0.66 +0.2 5,281,073 + -0.8 5,281,094 + +0.0 5,281,095 - -0.6 5,281,095 - -0.1 5,281,185 + +0.7 5,281,185 + -0.6 5,281,185 + -0.4 5,281,185 + +1.0 5,281,186 - +0.2 5,281,186 - -0.7 5,281,186 - +0.0 5,281,300 - -0.4 5,281,359 + +0.2 5,281,408 - AO356_23560 0.11 -0.7 5,281,408 - AO356_23560 0.11 +0.1 5,281,408 - AO356_23560 0.11 -1.5 5,281,408 - AO356_23560 0.11 +1.1 5,281,422 + AO356_23560 0.12 +0.8 5,282,109 + AO356_23560 0.41 -2.5 5,282,109 + AO356_23560 0.41 -1.1 5,282,110 - AO356_23560 0.41 -0.8 5,282,110 - AO356_23560 0.41 +1.1 5,282,110 - AO356_23560 0.41 +0.7 5,282,110 - AO356_23560 0.41 -0.5 5,282,110 - AO356_23560 0.41 +0.5 5,282,110 - AO356_23560 0.41 -1.0 5,282,122 - AO356_23560 0.41 -1.4 5,282,178 - AO356_23560 0.43 +0.3 5,282,430 + AO356_23560 0.54 -1.5 5,282,430 + AO356_23560 0.54 -0.7 5,282,431 - AO356_23560 0.54 +0.0 5,282,431 - AO356_23560 0.54 +1.1 5,282,440 - AO356_23560 0.54 -0.6 5,283,013 - AO356_23560 0.79 +0.6 5,283,193 + AO356_23560 0.86 +1.0 5,283,194 - AO356_23560 0.86 -0.3 5,283,219 + AO356_23560 0.87 -0.1 5,283,219 + AO356_23560 0.87 +0.8 5,283,219 + AO356_23560 0.87 -0.3 5,283,219 + AO356_23560 0.87 -1.1 5,283,220 - AO356_23560 0.87 +0.2 5,283,220 - AO356_23560 0.87 -0.5 5,283,255 + AO356_23560 0.89 -0.9 5,283,255 + AO356_23560 0.89 -1.5 5,283,255 + AO356_23560 0.89 +0.8 5,283,255 + AO356_23560 0.89 -0.2 5,283,255 + AO356_23560 0.89 +1.5 5,283,583 + -1.2 5,283,583 + -0.8 5,283,583 + +0.5 5,283,583 + -0.2 5,283,584 - -0.2 5,283,584 - -0.9 5,283,584 - +0.6 5,283,584 - +1.3 5,283,738 + -0.8 5,283,738 + +0.0 5,283,738 + +1.3 5,283,738 + -2.7 5,283,738 + +0.2 5,283,738 + -0.0 5,283,738 + +0.2 5,283,739 - -0.8 5,283,739 - -0.3 5,283,739 - +1.2 5,283,739 - +0.4 5,283,739 - +0.5 5,283,740 + +0.6 5,283,741 - +0.4 5,283,753 + -2.7 5,283,754 - +0.3 5,284,054 - AO356_23565 0.24 -0.2 5,284,297 + AO356_23565 0.38 -1.5 5,284,297 + AO356_23565 0.38 -1.0 5,284,297 + AO356_23565 0.38 +0.4 5,284,297 + AO356_23565 0.38 +1.1 5,284,402 - AO356_23565 0.44 +0.2
Or see this region's nucleotide sequence