Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23480 and AO356_23485 are separated by 3 nucleotides AO356_23485 and AO356_23490 overlap by 11 nucleotides
AO356_23480: AO356_23480 - FAD-binding monooxygenase, at 5,265,267 to 5,267,030
_23480
AO356_23485: AO356_23485 - haloacid dehalogenase, at 5,267,034 to 5,267,645
_23485
AO356_23490: AO356_23490 - AMP-dependent synthetase, at 5,267,635 to 5,269,155
_23490
Position (kb)
5267
5268 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5266.039 kb on + strand, within AO356_23480 at 5266.039 kb on + strand, within AO356_23480 at 5266.040 kb on - strand, within AO356_23480 at 5266.061 kb on + strand, within AO356_23480 at 5266.061 kb on + strand, within AO356_23480 at 5266.062 kb on - strand, within AO356_23480 at 5266.063 kb on + strand, within AO356_23480 at 5266.063 kb on + strand, within AO356_23480 at 5266.205 kb on + strand, within AO356_23480 at 5266.206 kb on - strand, within AO356_23480 at 5266.300 kb on + strand, within AO356_23480 at 5266.300 kb on + strand, within AO356_23480 at 5266.301 kb on - strand, within AO356_23480 at 5266.360 kb on + strand, within AO356_23480 at 5266.360 kb on + strand, within AO356_23480 at 5266.361 kb on - strand, within AO356_23480 at 5266.450 kb on + strand, within AO356_23480 at 5266.717 kb on + strand, within AO356_23480 at 5266.718 kb on - strand, within AO356_23480 at 5266.729 kb on + strand, within AO356_23480 at 5266.729 kb on + strand, within AO356_23480 at 5266.730 kb on - strand, within AO356_23480 at 5266.730 kb on - strand, within AO356_23480 at 5267.110 kb on + strand, within AO356_23485 at 5267.110 kb on + strand, within AO356_23485 at 5267.110 kb on + strand, within AO356_23485 at 5267.110 kb on + strand, within AO356_23485 at 5267.110 kb on + strand, within AO356_23485 at 5267.111 kb on - strand, within AO356_23485 at 5267.111 kb on - strand, within AO356_23485 at 5267.111 kb on - strand, within AO356_23485 at 5267.111 kb on - strand, within AO356_23485 at 5267.111 kb on - strand, within AO356_23485 at 5267.111 kb on - strand, within AO356_23485 at 5267.173 kb on - strand, within AO356_23485 at 5267.173 kb on - strand, within AO356_23485 at 5267.173 kb on - strand, within AO356_23485 at 5267.243 kb on - strand, within AO356_23485 at 5267.393 kb on - strand, within AO356_23485 at 5267.437 kb on + strand, within AO356_23485 at 5267.437 kb on + strand, within AO356_23485 at 5267.438 kb on - strand, within AO356_23485 at 5267.552 kb on + strand, within AO356_23485 at 5267.563 kb on + strand, within AO356_23485 at 5267.563 kb on + strand, within AO356_23485 at 5267.563 kb on + strand, within AO356_23485 at 5267.564 kb on - strand, within AO356_23485 at 5267.802 kb on + strand, within AO356_23490 at 5267.804 kb on + strand, within AO356_23490 at 5267.804 kb on + strand, within AO356_23490 at 5267.804 kb on + strand, within AO356_23490 at 5267.804 kb on + strand, within AO356_23490 at 5267.805 kb on - strand, within AO356_23490 at 5268.008 kb on + strand, within AO356_23490 at 5268.270 kb on - strand, within AO356_23490 at 5268.335 kb on + strand, within AO356_23490 at 5268.336 kb on - strand, within AO356_23490 at 5268.489 kb on - strand, within AO356_23490 at 5268.617 kb on + strand, within AO356_23490
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 5,266,039 + AO356_23480 0.44 -0.8 5,266,039 + AO356_23480 0.44 -0.8 5,266,040 - AO356_23480 0.44 +0.0 5,266,061 + AO356_23480 0.45 -1.5 5,266,061 + AO356_23480 0.45 -0.1 5,266,062 - AO356_23480 0.45 -1.0 5,266,063 + AO356_23480 0.45 +1.0 5,266,063 + AO356_23480 0.45 +0.7 5,266,205 + AO356_23480 0.53 +0.7 5,266,206 - AO356_23480 0.53 -3.6 5,266,300 + AO356_23480 0.59 +0.5 5,266,300 + AO356_23480 0.59 +0.2 5,266,301 - AO356_23480 0.59 +0.8 5,266,360 + AO356_23480 0.62 +0.3 5,266,360 + AO356_23480 0.62 -0.2 5,266,361 - AO356_23480 0.62 -0.6 5,266,450 + AO356_23480 0.67 -0.1 5,266,717 + AO356_23480 0.82 -1.8 5,266,718 - AO356_23480 0.82 -0.0 5,266,729 + AO356_23480 0.83 -0.2 5,266,729 + AO356_23480 0.83 +0.3 5,266,730 - AO356_23480 0.83 +1.3 5,266,730 - AO356_23480 0.83 -1.9 5,267,110 + AO356_23485 0.12 +0.4 5,267,110 + AO356_23485 0.12 +0.5 5,267,110 + AO356_23485 0.12 +0.1 5,267,110 + AO356_23485 0.12 -0.5 5,267,110 + AO356_23485 0.12 +1.1 5,267,111 - AO356_23485 0.13 +0.1 5,267,111 - AO356_23485 0.13 -0.4 5,267,111 - AO356_23485 0.13 -1.4 5,267,111 - AO356_23485 0.13 +0.1 5,267,111 - AO356_23485 0.13 +0.2 5,267,111 - AO356_23485 0.13 +0.2 5,267,173 - AO356_23485 0.23 -1.0 5,267,173 - AO356_23485 0.23 +0.3 5,267,173 - AO356_23485 0.23 -1.7 5,267,243 - AO356_23485 0.34 +0.2 5,267,393 - AO356_23485 0.59 -1.1 5,267,437 + AO356_23485 0.66 -0.4 5,267,437 + AO356_23485 0.66 -1.7 5,267,438 - AO356_23485 0.66 -0.2 5,267,552 + AO356_23485 0.85 +2.7 5,267,563 + AO356_23485 0.86 -0.8 5,267,563 + AO356_23485 0.86 -0.1 5,267,563 + AO356_23485 0.86 +0.8 5,267,564 - AO356_23485 0.87 -0.0 5,267,802 + AO356_23490 0.11 -0.3 5,267,804 + AO356_23490 0.11 +0.5 5,267,804 + AO356_23490 0.11 +0.7 5,267,804 + AO356_23490 0.11 +1.0 5,267,804 + AO356_23490 0.11 +0.3 5,267,805 - AO356_23490 0.11 +0.3 5,268,008 + AO356_23490 0.25 +0.8 5,268,270 - AO356_23490 0.42 +0.2 5,268,335 + AO356_23490 0.46 -0.0 5,268,336 - AO356_23490 0.46 +0.1 5,268,489 - AO356_23490 0.56 +0.7 5,268,617 + AO356_23490 0.65 +0.1
Or see this region's nucleotide sequence