Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22565 and AO356_22570 are separated by 340 nucleotides AO356_22570 and AO356_22580 are separated by 817 nucleotides
AO356_22565: AO356_22565 - hypothetical protein, at 5,044,230 to 5,044,502
_22565
AO356_22570: AO356_22570 - hypothetical protein, at 5,044,843 to 5,045,802
_22570
AO356_22580: AO356_22580 - cytochrome C, at 5,046,620 to 5,047,000
_22580
Position (kb)
5044
5045
5046 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5043.872 kb on + strand at 5043.945 kb on + strand at 5043.946 kb on - strand at 5043.949 kb on + strand at 5043.950 kb on - strand at 5043.950 kb on - strand at 5043.950 kb on - strand at 5043.994 kb on - strand at 5043.994 kb on - strand at 5043.994 kb on - strand at 5043.994 kb on - strand at 5044.006 kb on + strand at 5044.053 kb on + strand at 5044.075 kb on + strand at 5044.076 kb on - strand at 5044.085 kb on + strand at 5044.085 kb on + strand at 5044.085 kb on + strand at 5044.086 kb on - strand at 5044.086 kb on - strand at 5044.163 kb on + strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.164 kb on - strand at 5044.166 kb on + strand at 5044.166 kb on + strand at 5044.167 kb on - strand at 5044.378 kb on - strand, within AO356_22565 at 5044.378 kb on - strand, within AO356_22565 at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.492 kb on + strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.493 kb on - strand at 5044.522 kb on - strand at 5044.531 kb on - strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.586 kb on + strand at 5044.587 kb on - strand at 5044.587 kb on - strand at 5044.587 kb on - strand at 5044.636 kb on - strand at 5044.696 kb on + strand at 5044.696 kb on + strand at 5044.697 kb on - strand at 5044.697 kb on - strand at 5044.697 kb on - strand at 5044.850 kb on + strand at 5044.850 kb on + strand at 5044.850 kb on + strand at 5044.935 kb on - strand at 5045.030 kb on + strand, within AO356_22570 at 5045.030 kb on + strand, within AO356_22570 at 5045.030 kb on + strand, within AO356_22570 at 5045.086 kb on + strand, within AO356_22570 at 5045.087 kb on - strand, within AO356_22570 at 5045.087 kb on - strand, within AO356_22570 at 5045.151 kb on + strand, within AO356_22570 at 5045.152 kb on - strand, within AO356_22570 at 5045.428 kb on + strand, within AO356_22570 at 5045.428 kb on + strand, within AO356_22570 at 5045.430 kb on + strand, within AO356_22570 at 5045.431 kb on - strand, within AO356_22570 at 5045.431 kb on - strand, within AO356_22570 at 5045.431 kb on - strand, within AO356_22570 at 5045.431 kb on - strand, within AO356_22570 at 5045.465 kb on + strand, within AO356_22570 at 5045.466 kb on - strand, within AO356_22570 at 5045.672 kb on - strand, within AO356_22570 at 5045.672 kb on - strand, within AO356_22570 at 5045.672 kb on - strand, within AO356_22570 at 5045.672 kb on - strand, within AO356_22570 at 5045.745 kb on + strand at 5045.745 kb on + strand at 5045.745 kb on + strand at 5045.878 kb on + strand at 5045.878 kb on + strand at 5045.879 kb on - strand at 5045.879 kb on - strand at 5045.879 kb on - strand at 5045.879 kb on - strand at 5045.921 kb on + strand at 5045.921 kb on + strand at 5045.921 kb on + strand at 5045.921 kb on + strand at 5045.921 kb on + strand at 5045.922 kb on - strand at 5045.922 kb on - strand at 5045.922 kb on - strand at 5045.922 kb on - strand at 5045.922 kb on - strand at 5045.922 kb on - strand at 5045.998 kb on + strand at 5045.998 kb on + strand at 5045.999 kb on - strand at 5045.999 kb on - strand at 5046.136 kb on - strand at 5046.136 kb on - strand at 5046.136 kb on - strand at 5046.183 kb on - strand at 5046.183 kb on - strand at 5046.351 kb on + strand at 5046.352 kb on - strand at 5046.352 kb on - strand at 5046.483 kb on + strand at 5046.516 kb on - strand at 5046.522 kb on + strand at 5046.534 kb on + strand at 5046.592 kb on + strand at 5046.615 kb on + strand at 5046.648 kb on + strand at 5046.648 kb on + strand at 5046.648 kb on + strand at 5046.648 kb on + strand at 5046.648 kb on + strand at 5046.648 kb on + strand at 5046.649 kb on - strand at 5046.649 kb on - strand at 5046.649 kb on - strand at 5046.649 kb on - strand at 5046.649 kb on - strand at 5046.649 kb on - strand at 5046.752 kb on + strand, within AO356_22580
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 5,043,872 + +0.2 5,043,945 + -0.5 5,043,946 - +0.5 5,043,949 + -2.1 5,043,950 - +1.0 5,043,950 - +0.8 5,043,950 - -1.0 5,043,994 - +0.2 5,043,994 - -1.0 5,043,994 - +1.1 5,043,994 - +0.1 5,044,006 + +0.5 5,044,053 + -0.9 5,044,075 + +0.3 5,044,076 - -0.8 5,044,085 + -2.4 5,044,085 + +0.9 5,044,085 + +0.4 5,044,086 - -0.5 5,044,086 - +0.0 5,044,163 + +0.5 5,044,164 - -2.0 5,044,164 - +0.0 5,044,164 - +0.3 5,044,164 - -0.5 5,044,164 - +0.1 5,044,166 + -0.6 5,044,166 + +2.9 5,044,167 - +0.6 5,044,378 - AO356_22565 0.54 -0.6 5,044,378 - AO356_22565 0.54 -0.8 5,044,492 + +0.8 5,044,492 + -1.8 5,044,492 + +1.1 5,044,492 + -0.4 5,044,492 + +1.4 5,044,492 + +2.1 5,044,492 + -0.3 5,044,492 + -0.5 5,044,492 + +0.2 5,044,493 - +1.2 5,044,493 - +1.0 5,044,493 - +1.5 5,044,493 - +0.1 5,044,493 - +0.5 5,044,493 - +1.1 5,044,522 - +0.6 5,044,531 - +0.4 5,044,586 + +0.1 5,044,586 + +1.1 5,044,586 + +1.5 5,044,586 + +2.0 5,044,586 + +0.7 5,044,587 - +0.7 5,044,587 - -0.2 5,044,587 - +0.4 5,044,636 - +0.4 5,044,696 + +1.2 5,044,696 + +1.2 5,044,697 - -1.5 5,044,697 - +0.4 5,044,697 - -0.4 5,044,850 + +1.3 5,044,850 + -0.5 5,044,850 + -0.9 5,044,935 - +1.7 5,045,030 + AO356_22570 0.19 -0.8 5,045,030 + AO356_22570 0.19 -0.8 5,045,030 + AO356_22570 0.19 -0.1 5,045,086 + AO356_22570 0.25 +0.9 5,045,087 - AO356_22570 0.25 +1.4 5,045,087 - AO356_22570 0.25 -0.6 5,045,151 + AO356_22570 0.32 -0.1 5,045,152 - AO356_22570 0.32 -1.6 5,045,428 + AO356_22570 0.61 -0.3 5,045,428 + AO356_22570 0.61 -0.0 5,045,430 + AO356_22570 0.61 -0.4 5,045,431 - AO356_22570 0.61 -1.3 5,045,431 - AO356_22570 0.61 -0.4 5,045,431 - AO356_22570 0.61 -0.8 5,045,431 - AO356_22570 0.61 -2.6 5,045,465 + AO356_22570 0.65 +0.1 5,045,466 - AO356_22570 0.65 +0.6 5,045,672 - AO356_22570 0.86 -0.7 5,045,672 - AO356_22570 0.86 +0.5 5,045,672 - AO356_22570 0.86 -1.8 5,045,672 - AO356_22570 0.86 -0.8 5,045,745 + +1.2 5,045,745 + +0.3 5,045,745 + -0.0 5,045,878 + -0.3 5,045,878 + -1.6 5,045,879 - +0.2 5,045,879 - -0.7 5,045,879 - +0.1 5,045,879 - +1.7 5,045,921 + +0.4 5,045,921 + +0.6 5,045,921 + +1.4 5,045,921 + -2.2 5,045,921 + -1.3 5,045,922 - -1.1 5,045,922 - -1.3 5,045,922 - -0.3 5,045,922 - +1.0 5,045,922 - -0.1 5,045,922 - +1.9 5,045,998 + +0.7 5,045,998 + +0.3 5,045,999 - -1.0 5,045,999 - -1.5 5,046,136 - -1.8 5,046,136 - +0.6 5,046,136 - +1.6 5,046,183 - +0.6 5,046,183 - -0.2 5,046,351 + -1.6 5,046,352 - -0.2 5,046,352 - +1.1 5,046,483 + -0.0 5,046,516 - +0.8 5,046,522 + +1.3 5,046,534 + +0.6 5,046,592 + +1.8 5,046,615 + -0.1 5,046,648 + -0.4 5,046,648 + +1.1 5,046,648 + -0.9 5,046,648 + +0.5 5,046,648 + +0.0 5,046,648 + +0.7 5,046,649 - -3.0 5,046,649 - -1.2 5,046,649 - +1.4 5,046,649 - -0.7 5,046,649 - -1.0 5,046,649 - +0.3 5,046,752 + AO356_22580 0.35 +1.8
Or see this region's nucleotide sequence