Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21920 and AO356_21925 are separated by 86 nucleotides AO356_21925 and AO356_21930 are separated by 292 nucleotides
AO356_21920: AO356_21920 - AraC family transcriptional regulator, at 4,905,510 to 4,906,553
_21920
AO356_21925: AO356_21925 - hypothetical protein, at 4,906,640 to 4,907,053
_21925
AO356_21930: AO356_21930 - hypothetical protein, at 4,907,346 to 4,908,548
_21930
Position (kb)
4906
4907
4908 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4905.696 kb on + strand, within AO356_21920 at 4905.696 kb on + strand, within AO356_21920 at 4906.029 kb on + strand, within AO356_21920 at 4906.029 kb on + strand, within AO356_21920 at 4906.029 kb on + strand, within AO356_21920 at 4906.029 kb on + strand, within AO356_21920 at 4906.029 kb on + strand, within AO356_21920 at 4906.029 kb on + strand, within AO356_21920 at 4906.029 kb on + strand, within AO356_21920 at 4906.029 kb on + strand, within AO356_21920 at 4906.030 kb on - strand, within AO356_21920 at 4906.030 kb on - strand, within AO356_21920 at 4906.030 kb on - strand, within AO356_21920 at 4906.030 kb on - strand, within AO356_21920 at 4906.261 kb on + strand, within AO356_21920 at 4906.261 kb on + strand, within AO356_21920 at 4906.261 kb on + strand, within AO356_21920 at 4906.261 kb on + strand, within AO356_21920 at 4906.262 kb on - strand, within AO356_21920 at 4906.365 kb on + strand, within AO356_21920 at 4906.368 kb on + strand, within AO356_21920 at 4906.368 kb on + strand, within AO356_21920 at 4906.369 kb on - strand, within AO356_21920 at 4906.515 kb on + strand at 4906.515 kb on + strand at 4906.516 kb on - strand at 4906.516 kb on - strand at 4906.739 kb on + strand, within AO356_21925 at 4906.740 kb on - strand, within AO356_21925 at 4906.740 kb on - strand, within AO356_21925 at 4906.821 kb on + strand, within AO356_21925 at 4906.821 kb on + strand, within AO356_21925 at 4906.821 kb on + strand, within AO356_21925 at 4906.821 kb on + strand, within AO356_21925 at 4906.821 kb on + strand, within AO356_21925 at 4906.822 kb on - strand, within AO356_21925 at 4906.822 kb on - strand, within AO356_21925 at 4906.822 kb on - strand, within AO356_21925 at 4906.822 kb on - strand, within AO356_21925 at 4906.822 kb on - strand, within AO356_21925 at 4906.822 kb on - strand, within AO356_21925 at 4906.822 kb on - strand, within AO356_21925 at 4906.838 kb on + strand, within AO356_21925 at 4906.839 kb on - strand, within AO356_21925 at 4906.839 kb on - strand, within AO356_21925 at 4906.839 kb on - strand, within AO356_21925 at 4906.875 kb on + strand, within AO356_21925 at 4906.876 kb on - strand, within AO356_21925 at 4906.876 kb on - strand, within AO356_21925 at 4906.887 kb on + strand, within AO356_21925 at 4906.887 kb on + strand, within AO356_21925 at 4906.887 kb on + strand, within AO356_21925 at 4906.953 kb on + strand, within AO356_21925 at 4906.953 kb on + strand, within AO356_21925 at 4906.953 kb on + strand, within AO356_21925 at 4906.975 kb on - strand, within AO356_21925 at 4906.980 kb on + strand, within AO356_21925 at 4906.980 kb on + strand, within AO356_21925 at 4906.980 kb on + strand, within AO356_21925 at 4906.981 kb on - strand, within AO356_21925 at 4906.981 kb on - strand, within AO356_21925 at 4907.028 kb on - strand at 4907.039 kb on + strand at 4907.040 kb on - strand at 4907.040 kb on - strand at 4907.069 kb on + strand at 4907.085 kb on - strand at 4907.192 kb on - strand at 4907.193 kb on + strand at 4907.276 kb on - strand at 4907.480 kb on - strand, within AO356_21930 at 4907.480 kb on - strand, within AO356_21930 at 4907.750 kb on - strand, within AO356_21930 at 4907.750 kb on - strand, within AO356_21930 at 4907.750 kb on - strand, within AO356_21930 at 4907.750 kb on - strand, within AO356_21930 at 4907.782 kb on + strand, within AO356_21930 at 4907.782 kb on + strand, within AO356_21930 at 4907.782 kb on + strand, within AO356_21930 at 4907.782 kb on + strand, within AO356_21930 at 4907.782 kb on + strand, within AO356_21930 at 4907.782 kb on + strand, within AO356_21930 at 4907.782 kb on + strand, within AO356_21930 at 4907.783 kb on - strand, within AO356_21930 at 4907.783 kb on - strand, within AO356_21930 at 4907.783 kb on - strand, within AO356_21930 at 4907.839 kb on + strand, within AO356_21930 at 4907.840 kb on - strand, within AO356_21930 at 4907.840 kb on - strand, within AO356_21930 at 4907.952 kb on + strand, within AO356_21930 at 4907.953 kb on - strand, within AO356_21930 at 4907.953 kb on - strand, within AO356_21930
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 4,905,696 + AO356_21920 0.18 -0.3 4,905,696 + AO356_21920 0.18 -1.1 4,906,029 + AO356_21920 0.50 -1.1 4,906,029 + AO356_21920 0.50 -0.4 4,906,029 + AO356_21920 0.50 -0.6 4,906,029 + AO356_21920 0.50 +0.4 4,906,029 + AO356_21920 0.50 -0.5 4,906,029 + AO356_21920 0.50 +0.4 4,906,029 + AO356_21920 0.50 -0.5 4,906,029 + AO356_21920 0.50 -0.8 4,906,030 - AO356_21920 0.50 +0.7 4,906,030 - AO356_21920 0.50 -0.2 4,906,030 - AO356_21920 0.50 -0.7 4,906,030 - AO356_21920 0.50 +0.9 4,906,261 + AO356_21920 0.72 +0.2 4,906,261 + AO356_21920 0.72 -0.0 4,906,261 + AO356_21920 0.72 -1.5 4,906,261 + AO356_21920 0.72 -1.1 4,906,262 - AO356_21920 0.72 -0.7 4,906,365 + AO356_21920 0.82 +0.7 4,906,368 + AO356_21920 0.82 +0.4 4,906,368 + AO356_21920 0.82 +0.8 4,906,369 - AO356_21920 0.82 -0.8 4,906,515 + +0.1 4,906,515 + +0.7 4,906,516 - -0.4 4,906,516 - -1.2 4,906,739 + AO356_21925 0.24 -0.8 4,906,740 - AO356_21925 0.24 -0.0 4,906,740 - AO356_21925 0.24 +1.0 4,906,821 + AO356_21925 0.44 -1.9 4,906,821 + AO356_21925 0.44 -0.2 4,906,821 + AO356_21925 0.44 -0.6 4,906,821 + AO356_21925 0.44 -1.3 4,906,821 + AO356_21925 0.44 +0.1 4,906,822 - AO356_21925 0.44 +0.8 4,906,822 - AO356_21925 0.44 -0.7 4,906,822 - AO356_21925 0.44 -0.1 4,906,822 - AO356_21925 0.44 -3.7 4,906,822 - AO356_21925 0.44 -2.7 4,906,822 - AO356_21925 0.44 -0.1 4,906,822 - AO356_21925 0.44 -0.2 4,906,838 + AO356_21925 0.48 -1.3 4,906,839 - AO356_21925 0.48 -1.6 4,906,839 - AO356_21925 0.48 -1.2 4,906,839 - AO356_21925 0.48 -0.5 4,906,875 + AO356_21925 0.57 -2.6 4,906,876 - AO356_21925 0.57 -3.9 4,906,876 - AO356_21925 0.57 +0.0 4,906,887 + AO356_21925 0.60 +0.1 4,906,887 + AO356_21925 0.60 -1.7 4,906,887 + AO356_21925 0.60 +0.4 4,906,953 + AO356_21925 0.76 +0.6 4,906,953 + AO356_21925 0.76 -1.9 4,906,953 + AO356_21925 0.76 -0.7 4,906,975 - AO356_21925 0.81 +1.3 4,906,980 + AO356_21925 0.82 -0.9 4,906,980 + AO356_21925 0.82 -1.1 4,906,980 + AO356_21925 0.82 +0.5 4,906,981 - AO356_21925 0.82 +0.5 4,906,981 - AO356_21925 0.82 -2.9 4,907,028 - -0.5 4,907,039 + -0.9 4,907,040 - -0.5 4,907,040 - -0.3 4,907,069 + +0.8 4,907,085 - +1.4 4,907,192 - +0.7 4,907,193 + -0.5 4,907,276 - -0.4 4,907,480 - AO356_21930 0.11 +0.9 4,907,480 - AO356_21930 0.11 +0.7 4,907,750 - AO356_21930 0.34 -0.6 4,907,750 - AO356_21930 0.34 -0.7 4,907,750 - AO356_21930 0.34 +1.7 4,907,750 - AO356_21930 0.34 -1.1 4,907,782 + AO356_21930 0.36 +0.3 4,907,782 + AO356_21930 0.36 -1.0 4,907,782 + AO356_21930 0.36 +0.1 4,907,782 + AO356_21930 0.36 -0.9 4,907,782 + AO356_21930 0.36 -3.3 4,907,782 + AO356_21930 0.36 -1.4 4,907,782 + AO356_21930 0.36 +0.4 4,907,783 - AO356_21930 0.36 +0.5 4,907,783 - AO356_21930 0.36 +0.2 4,907,783 - AO356_21930 0.36 +0.6 4,907,839 + AO356_21930 0.41 -0.9 4,907,840 - AO356_21930 0.41 -1.0 4,907,840 - AO356_21930 0.41 +0.6 4,907,952 + AO356_21930 0.50 +0.3 4,907,953 - AO356_21930 0.50 -0.9 4,907,953 - AO356_21930 0.50 -0.3
Or see this region's nucleotide sequence