Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21785 and AO356_21790 overlap by 1 nucleotides AO356_21790 and AO356_21795 overlap by 4 nucleotides AO356_21795 and AO356_21800 overlap by 4 nucleotides AO356_21800 and AO356_21805 are separated by 214 nucleotides
AO356_21785: AO356_21785 - ABC transporter permease, at 4,876,766 to 4,877,548
_21785
AO356_21790: AO356_21790 - sulfonate ABC transporter ATP-binding protein, at 4,877,548 to 4,878,396
_21790
AO356_21795: AO356_21795 - PBS lyase, at 4,878,393 to 4,879,355
_21795
AO356_21800: AO356_21800 - hypothetical protein, at 4,879,352 to 4,879,639
_21800
AO356_21805: AO356_21805 - LexA family transcriptional regulator, at 4,879,854 to 4,880,471
_21805
Position (kb)
4878
4879
4880 Strain fitness (log2 ratio)
-2
-1
0
1 at 4877.399 kb on + strand, within AO356_21785 at 4877.399 kb on + strand, within AO356_21785 at 4877.399 kb on + strand, within AO356_21785 at 4877.399 kb on + strand, within AO356_21785 at 4877.400 kb on - strand, within AO356_21785 at 4877.400 kb on - strand, within AO356_21785 at 4877.415 kb on - strand, within AO356_21785 at 4877.430 kb on - strand, within AO356_21785 at 4878.084 kb on + strand, within AO356_21790 at 4878.085 kb on - strand, within AO356_21790 at 4878.085 kb on - strand, within AO356_21790 at 4878.404 kb on - strand at 4878.935 kb on + strand, within AO356_21795 at 4879.120 kb on - strand, within AO356_21795 at 4879.327 kb on + strand at 4879.328 kb on - strand at 4879.725 kb on + strand at 4879.725 kb on + strand at 4879.726 kb on - strand at 4879.729 kb on + strand at 4879.729 kb on + strand at 4879.730 kb on - strand at 4879.730 kb on - strand at 4879.730 kb on - strand at 4879.736 kb on + strand at 4879.736 kb on + strand at 4879.736 kb on + strand at 4879.736 kb on + strand at 4879.737 kb on - strand at 4879.982 kb on + strand, within AO356_21805 at 4879.982 kb on + strand, within AO356_21805 at 4879.983 kb on - strand, within AO356_21805 at 4879.983 kb on - strand, within AO356_21805 at 4880.205 kb on + strand, within AO356_21805 at 4880.205 kb on + strand, within AO356_21805
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 4,877,399 + AO356_21785 0.81 +1.2 4,877,399 + AO356_21785 0.81 +1.2 4,877,399 + AO356_21785 0.81 -0.6 4,877,399 + AO356_21785 0.81 +0.0 4,877,400 - AO356_21785 0.81 +0.7 4,877,400 - AO356_21785 0.81 +0.4 4,877,415 - AO356_21785 0.83 -2.2 4,877,430 - AO356_21785 0.85 +0.5 4,878,084 + AO356_21790 0.63 -0.3 4,878,085 - AO356_21790 0.63 -0.8 4,878,085 - AO356_21790 0.63 -0.6 4,878,404 - -0.9 4,878,935 + AO356_21795 0.56 -0.8 4,879,120 - AO356_21795 0.75 -0.4 4,879,327 + -0.9 4,879,328 - +1.6 4,879,725 + +0.8 4,879,725 + +1.2 4,879,726 - +0.6 4,879,729 + +0.3 4,879,729 + +0.1 4,879,730 - +0.3 4,879,730 - -0.2 4,879,730 - +0.3 4,879,736 + -0.3 4,879,736 + -0.3 4,879,736 + +0.8 4,879,736 + +0.0 4,879,737 - +0.5 4,879,982 + AO356_21805 0.21 +0.9 4,879,982 + AO356_21805 0.21 -0.5 4,879,983 - AO356_21805 0.21 -0.3 4,879,983 - AO356_21805 0.21 -0.5 4,880,205 + AO356_21805 0.57 -0.2 4,880,205 + AO356_21805 0.57 +1.5
Or see this region's nucleotide sequence