Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21725 and AO356_21730 are separated by 204 nucleotides AO356_21730 and AO356_21735 are separated by 130 nucleotides
AO356_21725: AO356_21725 - MFS transporter, at 4,862,138 to 4,863,760
_21725
AO356_21730: AO356_21730 - choline dehydrogenase, at 4,863,965 to 4,865,608
_21730
AO356_21735: AO356_21735 - LysR family transcriptional regulator, at 4,865,739 to 4,866,623
_21735
Position (kb)
4863
4864
4865
4866 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4863.318 kb on + strand, within AO356_21725 at 4863.318 kb on + strand, within AO356_21725 at 4863.318 kb on + strand, within AO356_21725 at 4863.318 kb on + strand, within AO356_21725 at 4863.318 kb on + strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.319 kb on - strand, within AO356_21725 at 4863.374 kb on + strand, within AO356_21725 at 4863.375 kb on - strand, within AO356_21725 at 4863.414 kb on + strand, within AO356_21725 at 4863.414 kb on + strand, within AO356_21725 at 4863.414 kb on + strand, within AO356_21725 at 4863.414 kb on + strand, within AO356_21725 at 4863.415 kb on - strand, within AO356_21725 at 4863.480 kb on + strand, within AO356_21725 at 4863.480 kb on + strand, within AO356_21725 at 4863.480 kb on + strand, within AO356_21725 at 4863.481 kb on - strand, within AO356_21725 at 4863.481 kb on - strand, within AO356_21725 at 4863.481 kb on - strand, within AO356_21725 at 4863.481 kb on - strand, within AO356_21725 at 4863.639 kb on + strand at 4863.640 kb on - strand at 4863.974 kb on - strand at 4863.974 kb on - strand at 4863.974 kb on - strand at 4864.269 kb on + strand, within AO356_21730 at 4864.269 kb on + strand, within AO356_21730 at 4864.270 kb on - strand, within AO356_21730 at 4864.371 kb on + strand, within AO356_21730 at 4864.371 kb on + strand, within AO356_21730 at 4864.372 kb on - strand, within AO356_21730 at 4864.528 kb on - strand, within AO356_21730 at 4864.617 kb on + strand, within AO356_21730 at 4864.618 kb on - strand, within AO356_21730 at 4864.623 kb on + strand, within AO356_21730 at 4864.624 kb on - strand, within AO356_21730 at 4864.624 kb on - strand, within AO356_21730 at 4864.698 kb on + strand, within AO356_21730 at 4864.699 kb on - strand, within AO356_21730 at 4864.699 kb on - strand, within AO356_21730 at 4864.699 kb on - strand, within AO356_21730 at 4865.050 kb on - strand, within AO356_21730 at 4865.289 kb on + strand, within AO356_21730 at 4865.289 kb on + strand, within AO356_21730 at 4865.290 kb on - strand, within AO356_21730 at 4865.290 kb on - strand, within AO356_21730 at 4865.313 kb on + strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.314 kb on - strand, within AO356_21730 at 4865.448 kb on + strand at 4865.448 kb on + strand at 4865.476 kb on - strand at 4865.476 kb on - strand at 4865.580 kb on + strand at 4865.580 kb on + strand at 4865.581 kb on - strand at 4865.586 kb on + strand at 4865.586 kb on + strand at 4865.587 kb on - strand at 4865.644 kb on + strand at 4865.645 kb on - strand at 4865.764 kb on - strand at 4865.847 kb on - strand, within AO356_21735 at 4865.904 kb on + strand, within AO356_21735 at 4866.232 kb on - strand, within AO356_21735 at 4866.246 kb on + strand, within AO356_21735 at 4866.246 kb on + strand, within AO356_21735 at 4866.309 kb on + strand, within AO356_21735 at 4866.309 kb on + strand, within AO356_21735 at 4866.310 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.454 kb on - strand, within AO356_21735 at 4866.516 kb on + strand, within AO356_21735 at 4866.517 kb on - strand, within AO356_21735 at 4866.554 kb on - strand at 4866.576 kb on + strand at 4866.576 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 4,863,318 + AO356_21725 0.73 +0.8 4,863,318 + AO356_21725 0.73 +0.7 4,863,318 + AO356_21725 0.73 +0.2 4,863,318 + AO356_21725 0.73 +0.1 4,863,318 + AO356_21725 0.73 +0.2 4,863,319 - AO356_21725 0.73 -0.4 4,863,319 - AO356_21725 0.73 -0.1 4,863,319 - AO356_21725 0.73 +0.2 4,863,319 - AO356_21725 0.73 +1.0 4,863,319 - AO356_21725 0.73 +0.1 4,863,319 - AO356_21725 0.73 -0.4 4,863,374 + AO356_21725 0.76 -0.7 4,863,375 - AO356_21725 0.76 +0.2 4,863,414 + AO356_21725 0.79 +0.2 4,863,414 + AO356_21725 0.79 +0.4 4,863,414 + AO356_21725 0.79 -0.2 4,863,414 + AO356_21725 0.79 +0.4 4,863,415 - AO356_21725 0.79 -0.3 4,863,480 + AO356_21725 0.83 -1.5 4,863,480 + AO356_21725 0.83 -0.3 4,863,480 + AO356_21725 0.83 +0.6 4,863,481 - AO356_21725 0.83 -0.2 4,863,481 - AO356_21725 0.83 -1.2 4,863,481 - AO356_21725 0.83 -0.6 4,863,481 - AO356_21725 0.83 +1.4 4,863,639 + -0.6 4,863,640 - +0.4 4,863,974 - +0.4 4,863,974 - +0.2 4,863,974 - +1.8 4,864,269 + AO356_21730 0.18 -1.5 4,864,269 + AO356_21730 0.18 +0.9 4,864,270 - AO356_21730 0.19 -0.3 4,864,371 + AO356_21730 0.25 -0.2 4,864,371 + AO356_21730 0.25 -0.5 4,864,372 - AO356_21730 0.25 -1.2 4,864,528 - AO356_21730 0.34 +0.3 4,864,617 + AO356_21730 0.40 +1.5 4,864,618 - AO356_21730 0.40 +1.7 4,864,623 + AO356_21730 0.40 -1.0 4,864,624 - AO356_21730 0.40 -1.0 4,864,624 - AO356_21730 0.40 -1.2 4,864,698 + AO356_21730 0.45 -0.0 4,864,699 - AO356_21730 0.45 +0.3 4,864,699 - AO356_21730 0.45 -2.0 4,864,699 - AO356_21730 0.45 -0.8 4,865,050 - AO356_21730 0.66 -0.8 4,865,289 + AO356_21730 0.81 -1.8 4,865,289 + AO356_21730 0.81 +0.6 4,865,290 - AO356_21730 0.81 -0.8 4,865,290 - AO356_21730 0.81 +0.6 4,865,313 + AO356_21730 0.82 +0.8 4,865,314 - AO356_21730 0.82 -0.3 4,865,314 - AO356_21730 0.82 +0.0 4,865,314 - AO356_21730 0.82 -0.6 4,865,314 - AO356_21730 0.82 +0.0 4,865,314 - AO356_21730 0.82 +0.3 4,865,314 - AO356_21730 0.82 -0.6 4,865,314 - AO356_21730 0.82 -2.2 4,865,448 + -0.1 4,865,448 + +0.1 4,865,476 - +0.7 4,865,476 - -0.6 4,865,580 + -1.0 4,865,580 + -2.4 4,865,581 - +0.1 4,865,586 + -0.2 4,865,586 + -0.1 4,865,587 - +1.5 4,865,644 + +0.3 4,865,645 - -0.9 4,865,764 - +0.1 4,865,847 - AO356_21735 0.12 +0.8 4,865,904 + AO356_21735 0.19 +0.4 4,866,232 - AO356_21735 0.56 -0.4 4,866,246 + AO356_21735 0.57 +0.8 4,866,246 + AO356_21735 0.57 -0.2 4,866,309 + AO356_21735 0.64 -0.8 4,866,309 + AO356_21735 0.64 +0.8 4,866,310 - AO356_21735 0.65 -1.2 4,866,454 - AO356_21735 0.81 -1.2 4,866,454 - AO356_21735 0.81 +0.8 4,866,454 - AO356_21735 0.81 -0.1 4,866,454 - AO356_21735 0.81 +0.2 4,866,454 - AO356_21735 0.81 +0.8 4,866,454 - AO356_21735 0.81 +0.1 4,866,454 - AO356_21735 0.81 +0.2 4,866,516 + AO356_21735 0.88 -0.9 4,866,517 - AO356_21735 0.88 -1.5 4,866,554 - +0.4 4,866,576 + -1.8 4,866,576 + +0.2
Or see this region's nucleotide sequence