Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21265 and AO356_21270 are separated by 232 nucleotides AO356_21270 and AO356_21275 overlap by 1 nucleotides AO356_21275 and AO356_21280 overlap by 1 nucleotides AO356_21280 and AO356_21285 overlap by 4 nucleotides
AO356_21265: AO356_21265 - hypothetical protein, at 4,771,988 to 4,773,067
_21265
AO356_21270: AO356_21270 - peptidase, at 4,773,300 to 4,773,608
_21270
AO356_21275: AO356_21275 - peptidase, at 4,773,608 to 4,773,919
_21275
AO356_21280: AO356_21280 - transcriptional regulator, at 4,773,919 to 4,774,587
_21280
AO356_21285: AO356_21285 - histidine kinase, at 4,774,584 to 4,775,897
_21285
Position (kb)
4773
4774 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4773.084 kb on + strand at 4773.098 kb on + strand at 4773.098 kb on + strand at 4773.098 kb on + strand at 4773.099 kb on - strand at 4773.100 kb on + strand at 4773.100 kb on + strand at 4773.101 kb on - strand at 4773.208 kb on - strand at 4773.260 kb on - strand at 4773.281 kb on + strand at 4773.282 kb on - strand at 4773.283 kb on + strand at 4773.283 kb on + strand at 4773.284 kb on - strand at 4773.284 kb on - strand at 4773.343 kb on + strand, within AO356_21270 at 4773.344 kb on - strand, within AO356_21270 at 4773.344 kb on - strand, within AO356_21270 at 4773.344 kb on - strand, within AO356_21270 at 4773.344 kb on - strand, within AO356_21270 at 4773.347 kb on + strand, within AO356_21270 at 4773.348 kb on - strand, within AO356_21270 at 4773.507 kb on + strand, within AO356_21270 at 4773.507 kb on + strand, within AO356_21270 at 4773.507 kb on + strand, within AO356_21270 at 4773.508 kb on - strand, within AO356_21270 at 4773.508 kb on - strand, within AO356_21270 at 4773.508 kb on - strand, within AO356_21270 at 4773.513 kb on + strand, within AO356_21270 at 4773.513 kb on + strand, within AO356_21270 at 4773.513 kb on + strand, within AO356_21270 at 4773.514 kb on - strand, within AO356_21270 at 4773.603 kb on - strand at 4773.607 kb on - strand at 4773.607 kb on - strand at 4773.607 kb on - strand at 4773.607 kb on - strand at 4773.824 kb on - strand, within AO356_21275 at 4773.824 kb on - strand, within AO356_21275 at 4773.824 kb on - strand, within AO356_21275 at 4773.908 kb on - strand at 4773.908 kb on - strand at 4774.030 kb on + strand, within AO356_21280 at 4774.031 kb on - strand, within AO356_21280 at 4774.051 kb on + strand, within AO356_21280 at 4774.051 kb on + strand, within AO356_21280 at 4774.051 kb on + strand, within AO356_21280 at 4774.210 kb on + strand, within AO356_21280 at 4774.211 kb on - strand, within AO356_21280 at 4774.399 kb on + strand, within AO356_21280 at 4774.456 kb on + strand, within AO356_21280 at 4774.561 kb on + strand at 4774.562 kb on - strand at 4774.562 kb on - strand at 4774.797 kb on + strand, within AO356_21285 at 4774.821 kb on + strand, within AO356_21285 at 4774.822 kb on - strand, within AO356_21285
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 4,772,776 - AO356_21265 0.73 -0.7 4,772,776 - AO356_21265 0.73 -0.9 4,772,776 - AO356_21265 0.73 -0.6 4,772,776 - AO356_21265 0.73 -0.5 4,772,776 - AO356_21265 0.73 +0.9 4,773,084 + +0.1 4,773,098 + -0.8 4,773,098 + +0.3 4,773,098 + +1.4 4,773,099 - +0.9 4,773,100 + +0.2 4,773,100 + +0.7 4,773,101 - +0.4 4,773,208 - +1.1 4,773,260 - -0.9 4,773,281 + -0.3 4,773,282 - +0.8 4,773,283 + -0.5 4,773,283 + +0.3 4,773,284 - -0.4 4,773,284 - +0.6 4,773,343 + AO356_21270 0.14 +1.6 4,773,344 - AO356_21270 0.14 -0.4 4,773,344 - AO356_21270 0.14 -1.0 4,773,344 - AO356_21270 0.14 +0.3 4,773,344 - AO356_21270 0.14 -0.7 4,773,347 + AO356_21270 0.15 -0.0 4,773,348 - AO356_21270 0.16 -1.1 4,773,507 + AO356_21270 0.67 -0.0 4,773,507 + AO356_21270 0.67 -0.1 4,773,507 + AO356_21270 0.67 +1.1 4,773,508 - AO356_21270 0.67 +0.4 4,773,508 - AO356_21270 0.67 -0.3 4,773,508 - AO356_21270 0.67 -0.2 4,773,513 + AO356_21270 0.69 +1.1 4,773,513 + AO356_21270 0.69 +0.2 4,773,513 + AO356_21270 0.69 -0.2 4,773,514 - AO356_21270 0.69 -1.0 4,773,603 - +2.1 4,773,607 - +0.8 4,773,607 - +1.9 4,773,607 - +1.6 4,773,607 - +0.6 4,773,824 - AO356_21275 0.69 +2.0 4,773,824 - AO356_21275 0.69 +2.4 4,773,824 - AO356_21275 0.69 +1.2 4,773,908 - -0.1 4,773,908 - -0.8 4,774,030 + AO356_21280 0.17 -0.3 4,774,031 - AO356_21280 0.17 -0.1 4,774,051 + AO356_21280 0.20 +0.5 4,774,051 + AO356_21280 0.20 +0.1 4,774,051 + AO356_21280 0.20 -1.1 4,774,210 + AO356_21280 0.43 -0.8 4,774,211 - AO356_21280 0.44 +0.8 4,774,399 + AO356_21280 0.72 +0.8 4,774,456 + AO356_21280 0.80 -2.4 4,774,561 + +1.5 4,774,562 - +0.0 4,774,562 - +0.7 4,774,797 + AO356_21285 0.16 +0.4 4,774,821 + AO356_21285 0.18 +1.1 4,774,822 - AO356_21285 0.18 +0.3
Or see this region's nucleotide sequence