Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21255 and AO356_21260 are separated by 180 nucleotides AO356_21260 and AO356_21265 are separated by 83 nucleotides
AO356_21255: AO356_21255 - alpha/beta hydrolase, at 4,770,537 to 4,771,367
_21255
AO356_21260: AO356_21260 - 6-carboxy-5,6,7,8-tetrahydropterin synthase, at 4,771,548 to 4,771,904
_21260
AO356_21265: AO356_21265 - hypothetical protein, at 4,771,988 to 4,773,067
_21265
Position (kb)
4771
4772 Strain fitness (log2 ratio)
-2
-1
0
1 at 4770.838 kb on + strand, within AO356_21255 at 4770.838 kb on + strand, within AO356_21255 at 4770.889 kb on + strand, within AO356_21255 at 4770.889 kb on + strand, within AO356_21255 at 4770.889 kb on + strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4771.201 kb on + strand, within AO356_21255 at 4771.202 kb on - strand, within AO356_21255 at 4771.202 kb on - strand, within AO356_21255 at 4771.202 kb on - strand, within AO356_21255 at 4771.252 kb on + strand, within AO356_21255 at 4771.253 kb on - strand, within AO356_21255 at 4771.253 kb on - strand, within AO356_21255 at 4771.253 kb on - strand, within AO356_21255 at 4771.339 kb on + strand at 4771.340 kb on - strand at 4771.340 kb on - strand at 4771.374 kb on + strand at 4771.407 kb on + strand at 4771.408 kb on - strand at 4771.408 kb on - strand at 4771.497 kb on + strand at 4771.497 kb on + strand at 4771.498 kb on - strand at 4771.498 kb on - strand at 4771.562 kb on - strand at 4771.562 kb on - strand at 4771.697 kb on - strand, within AO356_21260 at 4771.697 kb on - strand, within AO356_21260 at 4771.919 kb on + strand at 4771.919 kb on + strand at 4771.920 kb on - strand at 4771.920 kb on - strand at 4771.920 kb on - strand at 4771.990 kb on - strand at 4772.170 kb on - strand, within AO356_21265 at 4772.170 kb on - strand, within AO356_21265 at 4772.308 kb on - strand, within AO356_21265 at 4772.326 kb on - strand, within AO356_21265 at 4772.349 kb on + strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 4,770,838 + AO356_21255 0.36 -0.3 4,770,838 + AO356_21255 0.36 +1.1 4,770,889 + AO356_21255 0.42 -2.0 4,770,889 + AO356_21255 0.42 -1.9 4,770,889 + AO356_21255 0.42 -0.8 4,770,890 - AO356_21255 0.42 -1.6 4,770,890 - AO356_21255 0.42 +0.1 4,770,890 - AO356_21255 0.42 -0.2 4,770,890 - AO356_21255 0.42 -0.5 4,770,964 - AO356_21255 0.51 +0.1 4,770,964 - AO356_21255 0.51 +1.3 4,770,964 - AO356_21255 0.51 -1.1 4,770,964 - AO356_21255 0.51 +1.4 4,770,964 - AO356_21255 0.51 +1.2 4,770,964 - AO356_21255 0.51 -0.3 4,771,201 + AO356_21255 0.80 +0.7 4,771,202 - AO356_21255 0.80 +0.4 4,771,202 - AO356_21255 0.80 -1.3 4,771,202 - AO356_21255 0.80 +0.5 4,771,252 + AO356_21255 0.86 +1.5 4,771,253 - AO356_21255 0.86 +0.5 4,771,253 - AO356_21255 0.86 -0.7 4,771,253 - AO356_21255 0.86 -0.5 4,771,339 + -2.0 4,771,340 - -0.1 4,771,340 - +1.3 4,771,374 + +0.2 4,771,407 + -0.6 4,771,408 - +0.4 4,771,408 - -0.6 4,771,497 + -0.2 4,771,497 + +1.0 4,771,498 - -1.8 4,771,498 - -0.0 4,771,562 - +0.3 4,771,562 - +0.2 4,771,697 - AO356_21260 0.42 -0.6 4,771,697 - AO356_21260 0.42 -1.0 4,771,919 + +0.7 4,771,919 + +1.0 4,771,920 - +0.2 4,771,920 - -1.3 4,771,920 - +0.6 4,771,990 - -1.0 4,772,170 - AO356_21265 0.17 -0.5 4,772,170 - AO356_21265 0.17 -0.3 4,772,308 - AO356_21265 0.30 +0.8 4,772,326 - AO356_21265 0.31 -0.4 4,772,349 + AO356_21265 0.33 +0.4 4,772,776 - AO356_21265 0.73 -0.7 4,772,776 - AO356_21265 0.73 -0.9 4,772,776 - AO356_21265 0.73 -0.6 4,772,776 - AO356_21265 0.73 -0.5 4,772,776 - AO356_21265 0.73 +0.9
Or see this region's nucleotide sequence