Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_20095 and AO356_20100 are separated by 279 nucleotides AO356_20100 and AO356_20105 overlap by 4 nucleotides
AO356_20095: AO356_20095 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 4,495,464 to 4,496,483
_20095
AO356_20100: AO356_20100 - (2Fe-2S)-binding protein, at 4,496,763 to 4,497,233
_20100
AO356_20105: AO356_20105 - acylaldehyde oxidase, at 4,497,230 to 4,499,545
_20105
Position (kb)
4496
4497
4498 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4496.598 kb on - strand at 4496.606 kb on - strand at 4496.627 kb on + strand at 4496.628 kb on - strand at 4496.628 kb on - strand at 4496.662 kb on + strand at 4496.663 kb on - strand at 4496.663 kb on - strand at 4496.663 kb on - strand at 4496.663 kb on - strand at 4496.663 kb on - strand at 4496.745 kb on + strand at 4496.746 kb on - strand at 4496.746 kb on - strand at 4496.746 kb on - strand at 4496.746 kb on - strand at 4496.768 kb on + strand at 4496.846 kb on - strand, within AO356_20100 at 4496.846 kb on - strand, within AO356_20100 at 4497.057 kb on + strand, within AO356_20100 at 4497.057 kb on + strand, within AO356_20100 at 4497.171 kb on + strand, within AO356_20100 at 4497.171 kb on + strand, within AO356_20100 at 4497.171 kb on + strand, within AO356_20100 at 4497.171 kb on + strand, within AO356_20100 at 4497.171 kb on + strand, within AO356_20100 at 4497.172 kb on - strand, within AO356_20100 at 4497.172 kb on - strand, within AO356_20100 at 4497.172 kb on - strand, within AO356_20100 at 4497.413 kb on + strand at 4497.413 kb on + strand at 4497.414 kb on - strand at 4497.414 kb on - strand at 4497.617 kb on + strand, within AO356_20105 at 4497.617 kb on + strand, within AO356_20105 at 4497.759 kb on - strand, within AO356_20105 at 4497.843 kb on - strand, within AO356_20105 at 4497.938 kb on + strand, within AO356_20105 at 4497.965 kb on + strand, within AO356_20105 at 4497.965 kb on + strand, within AO356_20105 at 4498.039 kb on - strand, within AO356_20105 at 4498.083 kb on + strand, within AO356_20105 at 4498.089 kb on + strand, within AO356_20105 at 4498.169 kb on + strand, within AO356_20105 at 4498.170 kb on - strand, within AO356_20105
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 4,496,598 - -1.6 4,496,606 - -0.5 4,496,627 + +0.2 4,496,628 - +0.3 4,496,628 - -1.4 4,496,662 + -1.3 4,496,663 - -1.0 4,496,663 - -0.3 4,496,663 - -2.4 4,496,663 - +0.7 4,496,663 - +0.7 4,496,745 + +1.2 4,496,746 - -0.6 4,496,746 - +0.5 4,496,746 - -1.0 4,496,746 - +0.2 4,496,768 + +0.6 4,496,846 - AO356_20100 0.18 +0.1 4,496,846 - AO356_20100 0.18 -0.7 4,497,057 + AO356_20100 0.62 -0.3 4,497,057 + AO356_20100 0.62 +0.3 4,497,171 + AO356_20100 0.87 -0.5 4,497,171 + AO356_20100 0.87 +0.1 4,497,171 + AO356_20100 0.87 +0.3 4,497,171 + AO356_20100 0.87 -1.3 4,497,171 + AO356_20100 0.87 +0.5 4,497,172 - AO356_20100 0.87 -1.6 4,497,172 - AO356_20100 0.87 -0.3 4,497,172 - AO356_20100 0.87 +0.6 4,497,413 + -0.1 4,497,413 + -1.0 4,497,414 - -0.7 4,497,414 - -1.0 4,497,617 + AO356_20105 0.17 +0.6 4,497,617 + AO356_20105 0.17 -0.7 4,497,759 - AO356_20105 0.23 +1.0 4,497,843 - AO356_20105 0.26 +0.7 4,497,938 + AO356_20105 0.31 -2.7 4,497,965 + AO356_20105 0.32 -1.0 4,497,965 + AO356_20105 0.32 -1.1 4,498,039 - AO356_20105 0.35 -0.5 4,498,083 + AO356_20105 0.37 +1.9 4,498,089 + AO356_20105 0.37 +0.6 4,498,169 + AO356_20105 0.41 +0.6 4,498,170 - AO356_20105 0.41 +0.6
Or see this region's nucleotide sequence